Populus nigra (Lombardy poplar): 133668426
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Entry
133668426 CDS
T10372
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1-like isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00270
Cysteine and methionine metabolism
pnz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
133668426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnz03000
]
133668426
03032 DNA replication proteins [BR:
pnz03032
]
133668426
03036 Chromosome and associated proteins [BR:
pnz03036
]
133668426
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pnz02048
]
133668426
Enzymes [BR:
pnz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
133668426
Transcription factors [BR:
pnz03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
133668426
DNA replication proteins [BR:
pnz03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
133668426
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
133668426
Prokaryotic defense system [BR:
pnz02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
133668426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNMT1-RFD
DNA_methylase
BAH
Motif
Other DBs
NCBI-GeneID:
133668426
NCBI-ProteinID:
XP_061944255
LinkDB
All DBs
Position
11:complement(16415179..16424704)
Genome browser
AA seq
1575 aa
AA seq
DB search
MGSSSILDTTTNDPVDNTISSSSSVGMRKNKKGKQKSSVSNVKKEVPEKNTKGKKRNSPD
TNKEEPTGGDGSLKRPKRAAACKDFKEKSVRLHEEKSYVVESKKEQVVNEEILAVRLTQG
QGEGRPNRRLIDFVVHDANGNPQPLEMVEVDDMFISGIIMPHEESLDKEKEVHVRCDGFG
RIEAWDISGYEDGSPVIWLSTEVADYDCIKPAGGYKKFFDHFFQKALACVEVYKKLSRFS
GGNPEFTLDELLAGVVRAMSGNKCFSGAVSIKNFLISQGEFIYHQIIGLDETSKKNDKKF
ADLPVLVALRDESRNHGNVLIAKAANSGGNLVIGPESVDGAVVNQSNQSSTTAEEDEDAK
LARLLQEEEYWQSNMRQKKSRGSVSVSNTIYIKINEDEIANDYPLPAFYKHSNEETDEYI
AVASDDVIDHPDDLPRRMLHNWSLYNSDSRLISLELLPMKPCEDIDVTIFGSGSMTEDDG
SGFCLDDGPDQSSSRGLEAQDDMGLPIFLSAIKEWMIEFGSSMIFISLRTDMAWYRLGKP
SKQYASWYKPVLKTVKLARSIITLLKEQSRVSRLSFADVIRKVSEFKKDHHAYISSDLAA
VERYVVVHGQIILQLFAEFPDQKIKKCAFVVGLTRMMEERHHTKWVVNKKAIVQKCHSNL
NPRAAMDTVASGASKRKLMQATTTRLINRIWGEYYSNYSPEDLKEGNDCDVKEEDELEEQ
DENEDDDKEVVVEKTLKPYSVFEHCKSHTSQKEVRWDGNPIRKTSSGEDIYKQAIVCGQV
IVVGATVLVEVDEPDELPAIYFVEYMFETRNGSKMFHGRMMKCGSETVLGNTANDREVFL
TNECMNYKLQDVKQAIILEVRKRPWGHHHRKDNANADRIDREKAEERKKKGLPLEYYCKS
LYWPERGAFFTLPFDTMGLGSGVCHSCNLKISEEDKNISKVNSSQTGFSYKGTEYSVHDF
VYVSPHQFAVESGETETFKGGRNVGLKPYAVCQLLEVVPMETKQSETTSTEVKVQRFFRP
DDISPEKAYCSDIREIYYSEETHLLSVEVIEGKCEVRKKIDIPTCSAPAIFDHTFFCEHM
YDPSNGSLKQLPAHIKSKFSAVSKDGDVASRKRKGKSKEGENDTEDDKKLEASPEYRLAT
LDIFAGCGGLSEGLQQAGVSTTKWAIEYEEPAGEAFKLNHAESLMFINNCNVILRAVMER
CGDADDCISTSEAAKVASSLDAKVIDGLPLPGLVDFINGGPPCQGFSGMNRFNQSTWSKV
QCEMILAFLSFADYFRPKYFLLENVRNFVSFNKGQTFRLTIASLLQMGYQVRFGILEAGA
YGVSQSRKRAFIWAASPEEILPEWPEPMHVFAAPELKITLSEKSQYAAVRSTAYGAPFRA
ITVRDTIGDLPDVANGASKTNLEYGNDPISWFQKKIRGDMVVLTDHISKEMNELNLIRCK
NIPKRPGADWRDLPDEKVKLSTGQMVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSI
TDPQPMGKVGMCFHPEQDRILTVRECARSQGFPDNYQFFGNIQHKHRQIGNAVPPPLAYA
LGRKLKEALDSKRQK
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atgggatcttcatcaatattggatacaacaacaaatgacccagttgataatactatttct
tcttcatcatctgtaggtatgaggaagaacaaaaaagggaaacaaaaatcttcagtgtct
aatgtaaagaaagaagtgccagaaaaaaacacaaaagggaagaagagaaattcccctgat
accaacaaggaagagcctactggtggcgatggttcactgaaaaggcctaagagagctgct
gcatgcaaagatttcaaggagaaatctgtacgattgcatgaagagaagtcttatgttgtt
gaatcaaagaaagaacaagttgtcaatgaagaaattctagctgttcgtttgactcaaggg
caaggagagggtcgcccaaacaggagattgattgattttgttgtgcatgatgcaaatggc
aacccacagcccttggagatggttgaagttgatgatatgtttatctctggcattataatg
cctcacgaggaaagccttgacaaggaaaaagaagtgcatgttaggtgtgatggctttgga
aggatagaagcatgggatatctctggttatgaagatggatccccagtcatttggctgagt
actgaagtggcagattatgactgcattaagcctgctggtggctacaagaagttctttgat
catttcttccagaaggcacttgcttgtgttgaagtctacaaaaaactctcaagattctct
ggaggaaaccctgaattcacccttgatgagttgcttgctggggttgtgcgagcaatgagt
ggaaataagtgtttctctggtgcagtatccatcaagaatttcctcatttctcagggtgaa
tttatttatcaccaaataattggtttggatgagacttccaaaaagaatgataagaaattt
gcagacttgcctgttcttgtagccttgagagatgaaagtcgcaatcatggaaatgttctg
atagcaaaagcagcaaattctggtgggaacttggtgattggtccagaatctgtggatggt
gctgttgtgaatcagtctaaccaatccagtaccacagctgaggaagacgaggatgctaag
ttagcaagattattgcaggaagaagagtattggcagtctaatatgaggcagaagaaaagt
cgtggttcagtttctgtgtcgaacacaatctacatcaaaattaatgaagatgagattgca
aatgactaccctctccctgcgttttacaaacactctaatgaagaaaccgatgagtatata
gctgttgcaagtgatgatgtaattgaccaccctgatgatctccctagaagaatgcttcat
aactggtcactttataactcagactcaaggttgatttctttggagcttcttccaatgaaa
ccttgtgaagacattgatgtcaccatctttggatcaggaagtatgactgaagatgacgga
agcggattctgtcttgatgatggtcctgatcagtcttcttcaaggggtttggaggctcag
gatgacatgggtttaccgatatttttgagtgcgataaaggagtggatgattgagtttgga
tcatcaatgatttttatatcactacgcacggacatggcctggtatagacttggaaagcca
tcaaaacaatatgcttcctggtataagccagtcctaaaaacagttaagcttgcaagaagc
atcattacattgttgaaggagcaaagtcgagtatcacggctttcttttgcagatgtaatc
cggaaagtgtctgagttcaagaaggatcatcatgcttatatttcttctgatctagcagct
gttgagaggtacgtggttgtgcatggacagataatactacagctttttgctgagtttcca
gatcagaagatcaagaaatgtgcttttgtggtcggtttgactcgtatgatggaggagagg
caccatactaaatgggtagtgaacaaaaaagcaattgtgcaaaagtgtcattccaatttg
aatcctcgggctgcaatggatactgttgcttctggagcatccaagaggaagcttatgcag
gcaacaacaacaagactgatcaacagaatatggggggaatattattcaaactattctcca
gaggatttgaaagagggaaatgattgtgatgtaaaagaagaagatgaacttgaggaacag
gatgaaaatgaagatgatgataaagaggtggtggtagagaaaacactaaaaccttattca
gtgtttgaacattgtaaatcccatacttcacaaaaagaggtaagatgggatgggaatcct
ataagaaaaacatcttctggagaagacatttacaagcaagccattgtttgtggacaggtc
attgtggtgggggctactgtcttagtggaggttgatgaaccagatgaacttcctgccatt
tattttgtggagtacatgtttgaaacaagaaatggaagtaaaatgtttcatgggagaatg
atgaagtgcggatctgagacagttcttggtaacactgccaatgatagagaggttttctta
acaaatgaatgcatgaattataaactacaggatgttaagcaagcaataattctggaagtt
cgaaaaaggccttggggacatcatcacaggaaagataatgccaatgctgatagaattgat
agggaaaaggcagaagagaggaaaaagaaaggattgccactagaatattactgtaaaagc
ttgtactggccagaaaggggtgctttcttcactcttccatttgatactatgggtcttggc
tctggtgtctgccactcttgtaacttaaaaatatctgaagaagacaagaatatttccaaa
gtgaattcttctcaaacaggattttcatacaagggaactgagtactcagtccatgatttt
gtttatgtgagccctcatcaatttgccgtagaaagtggggagactgaaacttttaagggt
ggaaggaatgttggattgaagccttatgctgtgtgccagttattggaagttgttccaatg
gaaacaaaacaatctgaaacaacatccactgaggtcaaagttcaaagatttttcagacca
gatgatatttcacctgaaaaggcatattgttctgatattcgtgagatatattatagtgaa
gaaacacatcttttatctgttgaggtgattgaagggaaatgtgaagtcagaaagaaaatt
gatattcccacatgcagtgctcctgcaatctttgatcataccttcttctgcgagcacatg
tatgatccttccaatgggtccctcaagcagctaccagctcatatcaaatcaaagttttca
gctgtgagtaaagatggtgatgttgcaagtagaaagagaaagggaaagtctaaagaagga
gaaaatgatacagaagatgacaaaaaattagaagcatctccagagtaccgtttggccact
ttggatatttttgctggttgtggtggcttgtctgagggattgcagcaagctggtgtctca
acaaccaagtgggccattgaatatgaagagcctgctggggaagcatttaaactcaatcat
gcagaatcattgatgtttattaataattgcaatgtgatcctaagggctgtgatggagagg
tgtggagatgcagatgactgtatttctacttctgaggctgctaaagtggcttcatcactt
gatgcgaaggtgatcgatggtttgccattgccagggctcgtggatttcatcaatggaggg
cctccatgtcagggcttctctggaatgaataggtttaatcagagcacttggagtaaagtt
caatgtgagatgatcttagcattcttatcctttgctgattacttccgcccaaagtatttc
ctcttagagaatgtgaggaactttgtatctttcaataaaggacagactttccgtttaact
attgcttctcttcttcagatgggttatcaggtgagatttggaattttggaggccggagca
tatggagtttctcagtcacgcaaacgtgcctttatatgggcagcctcccctgaggagata
ctcccagaatggccagagccaatgcatgtttttgctgccccagagttaaaaataacattg
tctgagaagtcacaatatgctgctgttaggagtactgcttatggagcccctttccgtgca
ataactgtcagagatacaattggtgatctcccagatgtggcgaatggtgcttctaagaca
aatttggagtacggaaatgatcctatctcttggtttcaaaagaaaattcgaggcgacatg
gttgtcttgactgaccatatatcaaaagaaatgaatgagctgaatcttattagatgcaag
aatatcccaaagcggccaggtgctgattggcgtgatctcccagatgaaaaggtcaaattg
tctactgggcaaatggttgatttgataccatggtgccttccaaacacagctaaacgacac
aatcagtggaaggggctatttggaagattggattgggaagggaacttcccaacatcaata
acagatccccagccaatgggtaaggtggggatgtgctttcaccctgagcaggacaggatt
cttactgttcgtgaatgtgcacgatctcaaggattcccagataactatcagtttttcggt
aacattcaacacaagcatcggcaaattggaaatgctgttcctcctcctctagcatatgcg
ttgggaaggaaacttaaggaagcactggatagtaagaggcagaaatag
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integrated database retrieval system
