Populus nigra (Lombardy poplar): 133668448
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Entry
133668448 CDS
T10372
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta-like isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03015
mRNA surveillance pathway
pnz04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133668448
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133668448
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pnz01009
]
133668448
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnz03019
]
133668448
03036 Chromosome and associated proteins [BR:
pnz03036
]
133668448
Protein phosphatases and associated proteins [BR:
pnz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
133668448
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
133668448
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
133668448
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
RSA-1_C
Phage_Inh_C
DUF4187
wHTH-Calcineurin_assc
P2R3B_EF-hand
Motif
Other DBs
NCBI-GeneID:
133668448
NCBI-ProteinID:
XP_061944288
LinkDB
All DBs
Position
11:complement(13102856..13111344)
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AA seq
538 aa
AA seq
DB search
METTTSDVVMLDAELLQLPEISPLAFKSYPHFPQTLFDQWLSLPDPNKLVTSLVNDAKTG
APLNVSGNSSSANAATVNSLPSMFPAGSTPPLSPRSSTGSPRVTKPRAGPSNLGSPLKVV
SEPVKELIPQFYFQNGRPTPNELKEQCLIRINHFFYGRLDGLQIHEFKSVTKEVCKLPSF
FSTVLFRRIDVNSTDFVTRDAFLDYWINGNMLTLDIATQIFTILKQPDLKYLTQEDFKPV
LQELLATHPGLEFLQSTPEFQERYAETVIYRIFYYINRSGNGNLTLRELKRGNLIDAMQH
ADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDRVFS
QVARKFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGILTRNEMQFFYE
EQLHRMECMAQEPVLFEDILCQIIDMIGPEDESYITLRDLKGCKLSGSVFNILFNLNKFM
AFETRDPFLIRQERENPTLTDWDRFAHREYIRLSMEEDVEDASNGSAEVWDESLEAPF
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaacgacgagcgatgttgtcatgttagatgcggagttgcttcagctaccagag
atttcgcctttagctttcaaatcttaccctcactttccccaaacactcttcgatcagtgg
ctctctcttcccgatcccaataagctggtgacatccctggttaatgatgccaagacaggt
gctccattgaatgtctctggaaactcttctagtgcaaatgctgccactgttaattcctta
ccttccatgtttcctgcgggaagcacaccgcctctttctcccagaagttcaaccggttcc
cctcgtgtgacaaagccaagggctggcccatctaatttaggctctcctttgaaagtagtc
agtgagccagtaaaggagttgataccacagttttattttcaaaatggccgccccacacca
aatgaactaaaagaacaatgcttgattcggatcaatcactttttctatggccgcttggat
ggattgcaaatacatgagttcaaatcagtcacaaaggaagtatgcaagctgccatcattc
ttctccacggttctatttagaaggattgatgttaatagcaccgatttcgtgacaagggat
gcttttcttgattattggataaatggcaacatgttgacattggatatagctacccaaatt
ttcacaattttgaaacaaccagatctcaaatacctcacccaggaagactttaaacctgtg
cttcaagaactactggcaactcatccaggattggagttcttacagagcacacccgagttt
caggaaagatatgctgaaactgtaatatacagaattttttactacataaatagatctggg
aatggtaatcttaccctcagggagctgaagcgtgggaacttaattgatgcaatgcaacat
gcagatgaagaagaggacataaataaagttttgaggtacttctcttatgagcacttttat
gtgatatactgcaagttttgggagctggacacagatcatgattttcttatcgacaaagag
aaccttattagatatgggaaccatgcgcttacctaccggattgttgatagagtattctcc
caggttgctagaaaatttactagcaaggttgaaggaaagatgggatatgaagattttgtg
tatttcattttgtcagaggaagacaagtcatctgagccaagtcttgagtattggttcaaa
tgcatagatttggatggaaatggaatcctgacacggaatgagatgcagttcttttatgag
gagcagttgcataggatggagtgcatggctcaagagcctgtgctttttgaagatatatta
tgccagataattgatatgattggaccagaggatgagagctatatcacccttcgtgacctc
aaaggttgtaaactttcaggaagcgttttcaacatccttttcaaccttaataaatttatg
gcatttgaaacccgtgatccatttcttattcgtcaggagcgtgagaatccaacactgaca
gactgggatcgctttgcgcatagagaatatattaggctttcaatggaagaagatgttgaa
gatgcttctaatggcagtgcagaagtttgggatgaatcactagaggctcctttctga
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