Populus nigra (Lombardy poplar): 133668762
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Entry
133668762 CDS
T10372
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133668762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133668762
03036 Chromosome and associated proteins [BR:
pnz03036
]
133668762
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
133668762
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
133668762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR19_1st
WDR55
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_Aladin
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
Ge1_WD40
Beta-prop_VPS8
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_RIG_1st
RMC1_N
WDR54
Tricorn_2nd
CFAP43_N
DPPIV_N
Beta-prop_IFT80_2nd
Kelch_1
Motif
Other DBs
NCBI-GeneID:
133668762
NCBI-ProteinID:
XP_061944735
LinkDB
All DBs
Position
11:complement(12934219..12936518)
Genome browser
AA seq
455 aa
AA seq
DB search
MDAGSMNTSSSLKAQSRFPLQQQFLPRTNSKENLDRFIPNRSAMDMDYARFMLTEGRKGK
ENPTVNSPSREAYRKQLADSLNMNRTRILAFKNKPPAPVELMPQDHSHHHHQPKTAKPRR
HIPQTSERTLDAPDLVDDFYLNLLDWGSSNVLAIALGSTVYLWDASDGSTSELVTVDDED
GPVTSVNWAPDGRHIAIGLNNSHIQLWDSASNRQLRTLKGGHRSRVGSMAWNNHILTTGG
MDGQIINNDVRIRSHIVETYRGHTQEVCGLKWSASGQQLASGGNDNLIHIWDRSTALSNS
ATQWLHRLEDHTSAVKALAWCPFQGNLLASGGGGGDKSIKFWNTHTGACLNSIDTGSQVC
SLLWNKNERELLSSHGFTQNQLTVWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVATAAG
DETLRFWNVFGVPEIAAKAAPKANPEPFSHLNRIR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggatctatgaacacttcttcaagcttgaaagcacaatctcgtttccctctt
caacagcagtttcttccaagaacgaactctaaagaaaacttggatagatttataccaaac
aggtcagccatggatatggattatgcccgtttcatgctaacagaagggagaaaaggaaaa
gagaacccaacagtgaactcgccgtcaagagaggcttacaggaagcaacttgctgattcc
ttgaacatgaaccgaactcgaattctagctttcaagaacaagcctcctgcacctgttgag
ttgatgcctcaagaccactctcatcaccaccaccagcccaaaaccgccaagcctcgccga
catattcctcagacttctgagaggacattagatgcaccagatcttgtggatgatttctac
ctcaacttattggattggggcagcagcaatgttttagccatagctcttggaagcactgtt
tatttgtgggatgcttcagacggttctacctcagaattggtcacggttgatgatgaagat
ggacccgttaccagtgtcaattgggctcctgatggacgccatattgccataggcttgaac
aattctcatatacagttatgggattctgcttccaatagacagctaagaacattgaaagga
ggccacagatcgcgagttgggtcaatggcatggaacaatcacatcctgacaacagggggg
atggatggtcaaatcattaataatgacgtgagaattagatcacacattgttgagacttac
agagggcatacacaggaggtttgtgggcttaaatggtccgcttcaggtcaacaattagcg
agtggaggcaatgataatctaattcatatatgggatagatctacagcattatcaaactca
gcaacacagtggcttcacaggcttgaggaccatacttcagcagtgaaagccctggcatgg
tgtcctttccaagggaatttgctagcctctggaggaggtggaggagataagagtattaag
ttttggaatacacatacaggtgcctgcttgaactcgattgataccggatctcaggtgtgt
tctcttttgtggaacaagaatgaaagggaactacttagctctcatgggtttactcagaat
caactcactgtttggaaatatccatcaatggtgaaaatggcagagctcactggccatact
tctagagtcctttacatggctcagagtccggatggttgcacagttgcaacagcagcaggg
gatgaaacactcagattctggaatgtttttggagttcctgaaattgctgctaaggccgct
cctaaagcaaatccagagccattttctcacttgaatcgcattcgctga
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