Populus nigra (Lombardy poplar): 133668886
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Entry
133668886 CDS
T10372
Name
(RefSeq) light-mediated development protein DET1 isoform X1
KO
K10571
de-etiolated-1
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133668886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133668886
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
133668886
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Det1
Motif
Other DBs
NCBI-GeneID:
133668886
NCBI-ProteinID:
XP_061944869
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Position
12:complement(16044474..16051443)
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AA seq
534 aa
AA seq
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MLRNNNVVARIFQRQIQTPPPGTSVHCARRFYENLVPSFTIYDVECPDHSFRKFTDDGQY
LISFSRNHQDLIVYRPTWLSYSYKQEDCHLPSRAKRFDSFFTQLYCVPLASSNEVICKDF
FLYVITNQFGLFATSTAQIHDAPAIGGAIQGVPSIERITFHLLRLEDGVILDEKVFRNDF
INLAHNMGVFLYDDLLAVVSLRYQTIYILQIRESGNLVDVRAIGAFCREDDELFLNSNSQ
CMAVADRSKLHQSSGNHVDNGVHSNQLNSDNSFLCGIKQRLLSFIFQGIWSEETDKFQRV
QCLKKKFYFHFQDYVDLIIWKVQFLDRHHLLIKFGSVDGGLQVSRSADHHASFFAVYNME
TTEIVAFYQNSADELYLLFEQFCDHFYAMSRNSSYMNFISSHSNNIHALEQLRSIKYKAS
SLSQFVKKMLTSLPFSCQSLSPSPYFDQSLFRYDEKLISATDRHRPSTDHPIKFISRRQP
HTLKFKIKPGPEAGSLDGRTKKVSSFLFHPFLPLALSIQQTLFLQPSVNIHFRG
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggaacaacaatgtggttgccaggatttttcagcgccaaatccaaactcctcct
cctggaaccagcgttcattgtgctcggcgattctatgagaatttagtgcctagttttacc
atatacgatgttgaatgccccgatcattcattccgcaaattcaccgatgatggtcaatac
ctcattagttttagcagaaatcaccaggatctcattgtttatagacccacttggctctcc
tattcctacaaacaagaagattgtcatcttccatctagagctaagaggttcgacagcttc
ttcactcaactctactgtgtcccccttgcttccagcaatgaggttatttgcaaagatttc
tttctatatgtcatcaccaaccagttcggactctttgctacttccactgctcaaattcat
gatgcacctgctataggaggagctattcaaggagtcccttccatagaaagaattactttt
cacctcttgaggttggaagatggggtgatactagatgagaaggtctttcgcaatgatttt
attaacttggctcataacatgggtgtcttcctgtatgatgatttattggccgttgtgtcg
cttcgctatcagacaatatacattctccaaattagggaatctggtaaccttgttgatgtg
cgtgcgataggtgcattttgtcgtgaagatgatgaactttttcttaattctaacagtcag
tgcatggcagtggctgacagaagtaaactgcatcaatcatctgggaatcatgtcgataat
ggtgtccatagtaatcagctgaattcagacaattcttttctttgtggcattaaacaacgc
ttgctctcattcatttttcaaggaatatggagtgaagaaactgataaattccagagggtc
cagtgcttgaagaagaaattctatttccattttcaagattatgtcgacttgattatttgg
aaggtacaattcttggatcgtcatcatttgctaatcaagtttgggagtgttgatggaggg
cttcaggtatcacgaagtgctgatcaccatgcatcattctttgctgtatataacatggag
acaactgaaatcgttgcgttttaccagaattcagcagatgagctttatctcctgtttgag
cagttctgcgaccacttctatgctatgtcaagaaattcatcttacatgaatttcatatca
tcacactcaaataacatccatgctcttgagcaactacggtccatcaagtataaagccagc
agtctttcacagtttgtgaagaagatgctgacatctttacctttcagttgtcaatcactg
agtccttcaccctattttgatcaatctctctttcggtacgatgaaaagctgatatctgcg
actgaccgacatagaccatcgacagatcatcctatcaagttcatttctagaaggcaacca
cataccctaaaatttaagattaagccaggtcctgaagctggaagtttagatggtcgaaca
aaaaaggtgtcgtcattcctgttccatccttttttacccctggctctttccattcagcag
acgctgttcttgcaaccatcagtgaatattcactttcgagggtga
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