Populus nigra (Lombardy poplar): 133669006
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Entry
133669006 CDS
T10372
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide-gated ion channel 18
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
133669006
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pnz04040
]
133669006
Ion channels [BR:
pnz04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
133669006
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Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
133669006
NCBI-ProteinID:
XP_061945006
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Position
12:complement(11930579..11932683)
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AA seq
687 aa
AA seq
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MNRLIHTPTAKFRRFRRHHQHATSTTDPNPLQILWRYQILDPDSEIVMYWNHVFLLTSII
ALFIDPLYFYLPYVGPQNRDRITIHSDYIYVCLSIDKQLSVLITYFRSIADMFFSLHILM
KFRTAFVAPSSRVFGRGELVIDAKEIAMRYLKSDFLIDLAAALPLPQIVIWLVIPATRNN
STDHANTTLSLIVLIQYIPRMFLIFPLHQRIVRSTGFVAKAAWAGAGYNLILYMLASHAL
GASWYTLSMGRQFYCWKSECTKENKAGIVGCIHSYLDCNSLGNPERQYWRNVTDVPANCD
ARNDTLTFKYGIFADAFINDVASSRFIEKFLYCLWWGLRNLSSYGQTLETSTFLGENVFC
ILICIIGLVLSAQLIGNMQTNLQSMTVRVEEWRIKRRDTEEWMRHRQLPPDLQERVRRFV
QHKWLATRGVHEESILHSLPLDLRREIQRHLSLALVRRVPFFSQMDDQLLDAICERLVSS
LSTEGTYIVREGDPVNEMLFVIRGQLESSTTNGGRSGFFNSITLRPGDFCGEELLTWALM
PISSANLPSSTRTVKALSEVEAFALEAKDLKFFAHQFKRLQSKKLQHAFRYYSHQWRTWA
ACLIQSVWRRHKKRKMTKELALRNSIGYIQIPEREYYYSDDQAYGDYEEXNLGATTLASR
FSADTKTEIHQKSGSFCFLQLKHGTLV
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgaatagacttattcacaccccaacagcaaagttccgccgcttcaggcgccaccaccaa
catgccactagcacaacagatcctaaccctctccaaatcctatggcggtaccagatactg
gatccggacagcgagattgtaatgtattggaaccatgtcttccttctcacttccatcatt
gcactcttcatcgaccctctctacttttacctcccttatgtcggtcctcagaaccgagac
cgaattactatccattccgactatatttatgtttgcttatccatcgacaaacaactttct
gtgttgatcacgtattttaggtccatagcagacatgtttttctcccttcatattcttatg
aagtttcgtacagcttttgttgctcctagttctagagtttttggacggggagaacttgtt
attgatgctaaggagattgcaatgcgttatctcaagtctgatttcctcatcgatctggct
gctgcgcttccgcttcctcagattgtcatctggttagtaattccggccacaagaaacaac
agcactgaccatgccaacaccacgctctcgcttatcgttcttattcaatacattcccaga
atgtttcttatctttcctttgcatcaaaggatcgtaagatctacaggttttgttgccaag
gctgcctgggctggagctggatacaatctaattctttacatgctggccagccatgcatta
ggtgcttcttggtatacattgtcaatggggaggcaattctattgctggaaatcagaatgt
acgaaagagaataaggcaggaattgtaggttgcatccatagctatctagactgtaatagt
ttgggaaatcctgaacgccaatattggaggaatgttaccgatgttcctgctaattgtgat
gcacgtaacgacactctcacgtttaagtatggaatatttgctgatgcttttatcaatgat
gttgcttcctcacgtttcattgagaagttcttgtactgtctctggtggggcttaagaaat
ttgagctcatatggtcagaccttggaaacgagcacatttctgggtgagaatgtgttctgt
attctcatatgcattattggtttagttctctcggcacagttaataggcaacatgcagacc
aacttgcaatctatgactgtgagagttgaagagtggaggattaagcggagggatacagaa
gagtggatgaggcatcgccagttacctccagatttgcaagaacgtgttcgccgatttgtt
cagcacaaatggcttgctactagaggagttcatgaagaatcgatactgcattcattgcct
ttggacctccgacgagaaattcagcgacacttatctctggcccttgttcgtcgggtccca
ttcttctcacaaatggatgaccagctactcgatgccatatgtgaacgcctggtgtcatca
ttgagtaccgagggaacttacatagttcgagagggtgatccagtcaatgagatgttgttt
gtcattagaggacaattagagagctcaaccactaatggaggaaggtctggattcttcaat
tccatcacccttagacctggtgacttctgtggtgaggaattactcacttgggccttaatg
ccaatatcaagtgcaaacctgccttcttcaacacgaactgtgaaagccctttctgaagtt
gaagcttttgcacttgaagctaaagaccttaaattttttgcacatcaattcaagcgactg
caaagcaagaagttgcagcatgcttttaggtactattctcaccaatggagaacatgggct
gcttgtttaatacaatctgtttggagaaggcataaaaagagaaagatgacaaaggagtta
gctttgcgaaatagcattgggtacattcaaattcctgagcgagaatattactatagtgat
gatcaagcatatggagattacgaggagtagaatctcggagccacaaccttggcttcaaga
ttttccgcagacactaaaacagagattcaccagaagagtggttcgttctgcttcctccag
cttaaacatgggacacttgtgtaa
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