Populus nigra (Lombardy poplar): 133669054
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Entry
133669054 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133669054 isoform X1
KO
K23288
syndetin
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133669054
Membrane trafficking [BR:
pnz04131
]
Protein recycling
Others
EARP complex
133669054
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Vps53_N
Motif
Other DBs
NCBI-GeneID:
133669054
NCBI-ProteinID:
XP_061945051
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Position
1:28122176..28143121
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AA seq
1110 aa
AA seq
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MQPNLFPIGSVLGNPFLLNDDLGEDGVGFGFERSRLFFLVPFLLLQGVGGGGSSGGMDLS
KVGEKILSSVRSARSLGLLPLTIDRPEVPARAAAAAAVARVLAGMPPHQRFNLPSSSEEL
RSIYGSIPQGHMVEELEEDFYEEDFDPVRHILEHVPSEENELTYFEEQATLRLAQLDRVA
ERLSLHVMEHHEVMVKGMNLVREVEKDLKVANVICMNGRRHLTSSMNEVSRDLVVNSNSK
RKQTLLDMLAVLTELHRALDMQVALESLVEKGNYCKAFQVLSEYLQLLDSFSELPAIQEM
SRGVEVWLGRTLQKLDALLLGVCQEFKEESYITVVDAYALIGDISGLAEKLQSFYMQEVL
SETHSVLKNTVLEDLEIQMQNSRLTYSDLSLQIPESKFRQCLLRTLAVLFRLISSYHEIM
NFQLENKDLAYQTSDMKQDSLGSNGSPRESVDRMLGSSPTEESTTTYMYLDSNFDADETR
SNCGEASISGSPWYHLRKDATAFVSQTLQRGRKNLWQLTTSRVSVLLSSAVISSMSTHQF
LKNYEDLNVFILAGEAFCGVEAVEFRQKLKAVCENYFLAFHRQNIHALKMVLEKESWLKL
PPDTVQAISFAGLVGNGAALIVPSHGISSNAKLHHSNKSVNSIDATIKKSGFTSWIKSGN
PFLPKIISTSVEGCSSSLLNGATAGEYDGHANDSYHGDQASPHSGGASNKNGTPVSEDEN
EDLLADFIDEDSQLPSRISKPKAPKSNFSHCKDDEISAQTGSSLCLLRSMDKYARFMQKL
EIVNVEFFKGICQLFEIFFYSVFETFGQQNSNSNGKSDPLNYRLKTAISRITQDCDQWIK
PQLTPVSSSSPTSLSTYMHGDVTPASPPNHATSFGLKTIVLQERCAAADTISLVAQILHR
SKTHLQSMLLQNNPAIVEDFFVLVVDSVPDVIEHLHRTTARLLLHINGRYVDRIANAKWE
VKELGLEHNGYVDLLLGEFKHYKTRLAHGGIHKEAQDRLSEYGVEIVAETLIEGLSRVKR
CSDEGRALMSLDLQVLINGLQHFVPVNVKPKLQMVETFIKAYYLPETEYVHWARAHPEYT
KNQIVGLINLVAAMKGWKRKTRLEVIEKIE
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgcagccaaatctgttcccaatcggtagcgtattagggaatccttttctgttaaatgat
gatttaggagaagacggtgtcggttttggatttgagcgctccagattattctttttggtt
ccgtttttattgttacaaggagtaggaggaggaggaagcagcggcggaatggatttgtct
aaagttggtgagaagattttgagttctgttcgctctgctagatctctcggtctcttgcct
ctcactattgatcgacctgaggttccagctcgagctgcagcagcagctgctgttgctcgc
gtgcttgcaggaatgcctcctcatcagcggtttaatcttccttcaagttctgaagaacta
cgatcaatatatggaagcataccacaaggtcacatggtggaggagctggaagaagacttc
tatgaagaggattttgatccagttaggcatattctagagcatgttccatctgaagaaaac
gagttaacgtattttgaggaacaggccactcttagattagcacaactagacagagtagca
gagcgtttatctcttcatgtcatggagcatcatgaagtaatggtgaaggggatgaatttg
gtgagggaagtagagaaagatttaaaggttgctaatgtcatctgcatgaatggtagaagg
cacctgacttcatcaatgaatgaggtttctagggatcttgtagtgaatagtaattccaaa
aggaaacaaactctcctggacatgcttgcagtattaactgagcttcatcgtgcattggac
atgcaagtggcacttgaatccctggttgaaaaaggaaattactgcaaggcattccaagtc
ctatccgagtatttacagctattagatagtttctcagagcttccagcaatacaggagatg
agccgtggagttgaggtttggttgggaagaacccttcaaaagctggatgcccttttgctg
ggagtgtgccaggagttcaaggaggagagttatataacagtagttgatgcatatgctttg
attggagatatctctggtcttgctgaaaagttgcaaagcttctatatgcaggaagtttta
tcagaaacccactctgtgttgaagaatactgtgctggaggatctggaaatacagatgcag
aacagtagacttacctacagtgatctaagccttcagatacctgaatctaagttcaggcag
tgtttgttgagaacattagcggtcttattcaggttgattagttcctatcatgaaatcatg
aacttccagctggagaacaaggatttggcataccaaacatctgacatgaagcaggattcc
ttaggaagcaatggatctccccgtgaatctgtagatagaatgcttggttcatctcctacc
gaggaatctacaacaacttacatgtatttagattccaattttgatgcagatgaaactaga
agtaattgtggtgaagcatcaatcagtggatctccttggtatcatctgcgaaaagatgcg
acagcatttgtttcacaaactcttcagcgaggtcgaaagaatctttggcagcttacaaca
agccgagtatcagtgttgctttcttctgcagttattagctctatgagcacacaccaattc
ttgaaaaattatgaagatttgaatgtattcatcttggctggggaagccttctgtggagtt
gaagcagttgagttcagacagaagttgaaggctgtatgcgagaactattttcttgcattt
catcggcaaaatattcatgcactcaaaatggttttggaaaaggaaagttggctgaaattg
ccaccagatacagtccaagcaattagttttgctgggcttgttggcaatggggctgccctg
atagttccatctcacggtatctcttcaaatgcaaaattgcatcactctaacaaatcagtg
aattccattgatgccactatcaaaaagagtggatttacctcttggattaaaagtggaaat
ccatttttgccaaaaataatctccacttctgttgaaggctgcagttcatccctgcttaat
ggggcaactgctggtgaatatgatggacatgctaatgatagttatcacggtgatcaggcg
tctccccatagtggtggtgcaagtaataaaaatggaactcctgtttcagaagatgaaaat
gaagatcttcttgcagactttattgatgaggacagtcaactcccaagtcgaatttcaaaa
ccaaaagctcctaaaagtaacttttcacattgtaaagatgatgagatatctgcacagaca
ggatcatctctctgtcttctcagatcaatggacaaatatgcaaggttcatgcagaaacta
gaaatagtaaatgttgagttttttaagggtatatgccagttgtttgagattttcttctat
tctgtgtttgaaacatttggtcagcagaactctaattcaaatggaaaatctgaccctctc
aattatcggctgaagactgctatatccagaattacacaagattgtgaccaatggataaag
ccccagctgacccctgtttcatcctcttcccctacgtctttgagtacatatatgcatgga
gatgtaacaccggctagtcctccaaatcatgccacatcctttggtctcaagaccattgtg
ttgcaggaaagatgtgctgctgctgataccatatctcttgttgctcaaatattacacaga
tctaaaacccatcttcagtcaatgcttcttcaaaataatccagctatagtggaagacttt
tttgtcctcgtggtggactctgtaccagatgttatagagcacttacaccggaccactgca
agattacttcttcacattaatggcaggtatgttgatcggatagctaatgctaagtgggaa
gtaaaagagcttggtctagagcataatgggtatgttgatttacttttgggagagtttaag
cactataaaacgaggcttgcacatggtggaattcacaaagaggcacaagaccgtctttca
gaatatggtgttgaaatcgttgctgaaaccctcatagaaggtctatcacgggtgaagagg
tgtagtgatgaaggacgagctcttatgtcattagatcttcaggttttgatcaatggcctc
cagcattttgtccccgtaaatgtaaagccaaaattacaaatggttgaaactttcataaag
gcttactaccttccagaaaccgagtatgtacactgggctcgtgctcacccggaatacacc
aaaaatcaaattgttgggttgatcaatctcgttgctgcaatgaaaggttggaagagaaaa
accaggttggaagtgatcgagaaaattgagtga
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