Populus nigra (Lombardy poplar): 133669135
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Entry
133669135 CDS
T10372
Name
(RefSeq) heat stress transcription factor A-5
KO
K09419
heat shock transcription factor, other eukaryote
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnz03000
]
133669135
Transcription factors [BR:
pnz03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
133669135
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
DivIC
DUF3450
APG6_N
TMF_TATA_bd
DUF7491
AAA_23
Motif
Other DBs
NCBI-GeneID:
133669135
NCBI-ProteinID:
XP_061945150
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All DBs
Position
1:17436587..17439619
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AA seq
489 aa
AA seq
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MEAGPSSATSGGGGGGGGPAPFLVKTYDMVDDSSTDEIVSWSSNKNSFVVWNPPEFARLL
LPTFFKHNNFSSFIRQLNTYGFRKIDPERWEFANEDFVKDQKHLLKNIYRRKPIHSHSQP
QGSLVDPERAAYEEEIEKLARDKAKLEASILGFEQQRSSAKLQVEDLTQKIDTMQQRQEK
LLSFLEKAVQNPTFVEHLARKIEAMDFSAYSKKRRLPQVDHPMPIAENSLVENHSSSRPE
SNVIHQDFPDKLRLELSPAVSDINLVSHSTQSSNEDGGSPQRKISEGNPKDALTRTSGLL
LAPETLELSDTGASYAFKVNPAVPRDIPANGSPALHSLQSNLTSNEEVDGHISCQLNLSL
ASSPLQANKNPYLTRIPQLGQEIGKSPESRFNESNKDSDIRVSQNNINLGNEGRALSNSQ
ETPNINQAPASAPVRVNDVFWEQFLTERPGYSDNEEASSSYRANPYDERERRIGFGEPRN
AKNMEQLSL
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaggaccatcgtcagcgacctcaggaggtggtggtggaggaggaggaccggcg
ccgttcttggtaaagacatatgacatggtggatgattcatcgaccgacgagatcgtgtct
tggagttcgaataaaaacagctttgttgtttggaaccctccagaattcgccagattgttg
ctccctacctttttcaagcacaataatttttctagctttatcagacaattaaatacctat
ggatttagaaagattgatcctgagagatgggaatttgccaacgaagattttgtgaaagat
caaaagcacctgcttaagaatatctaccgaagaaaaccaatccacagtcatagtcaacct
caaggttctttagtggatccagaaagagcagcatatgaggaagaaatagaaaagcttgca
cgtgataaagctaaactcgaggcaagtattctagggtttgaacagcagcggtcatctgca
aagctacaggtggaagatctaacacagaagatagatactatgcagcagaggcaggaaaag
ctgctgtcgttcttagagaaggctgttcaaaaccctacttttgttgaacaccttgctcgt
aagattgaagctatggatttttcagcctatagcaagaagagacgattgccccaagttgat
cacccaatgccaattgcagaaaatagtcttgtggaaaatcacagtagttctagacctgag
tcgaatgtcatccatcaagatttcccagataagttgagactggaattgtcaccagctgtt
tcagatattaatttggtttcacacagcacacagagctccaatgaagatgggggaagccca
caaagaaaaatatctgaggggaatccaaaagatgcactgactaggacatcaggtttacta
ttggcacctgaaacattggaactttcagacacaggggcatcgtatgcatttaaagtgaat
ccagctgtcccaagagacataccagcaaatgggagcccagcactacattcactgcagtcg
aatttgacttctaatgaagaagttgatggtcacatttcctgtcagctaaatcttagtctg
gcatcttctcctttgcaagccaacaaaaatccttatttaactaggatacctcaactaggc
caggaaattggcaaatctccagaatcaaggtttaatgagagtaacaaagattctgatatc
cgagttagtcagaacaacataaatctgggtaacgagggcagagctttatccaattcccag
gagaccccaaatatcaatcaagcacctgcatcagctccagttagagtgaatgatgttttc
tgggaacagttcctaactgaaaggcccggctattctgataatgaagaggcaagttctagt
tacagagcaaacccatatgatgagcgagaaagaaggataggttttggagagccacgaaat
gctaaaaacatggagcagctctctctgtga
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