KEGG   Populus nigra (Lombardy poplar): 133669318
Entry
133669318         CDS       T10372                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133669318
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pnz03041]
    133669318
   03400 DNA repair and recombination proteins [BR:pnz03400]
    133669318
Spliceosome [BR:pnz03041]
 Complex B
  Other components
   Prp19 complex
    133669318
 Complex C
   Prp19-CDC5 complex
    133669318
DNA repair and recombination proteins [BR:pnz03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    133669318
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect
Other DBs
NCBI-GeneID: 133669318
NCBI-ProteinID: XP_061945393
LinkDB
Position
12:3436344..3443493
AA seq 1069 aa
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDDNYDPGDDPR
KLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARR
LASLQKRRELKAAGIDNRHRRRKRKGIDYNSEIPFEKRPPPGFYDVADEDRPVEQPKFPT
TIEEIEGKKRMDIEAQLRKQDAAKNKIAERQDAPSAILQANKLNDPETVRKRSKLMLPAP
QISDHELEDIAKMGYASDLLAGSEELMEGSGATRALLANYAQTPRQGMTPLRTPQRTPAG
KGDAIMMEAENLARLRESQTPLLGGENPDLHPSDFSGVTPKKREIQTPNPMLTPSATPGG
VGLTPRIGMTPSRDSFGITPKGTPIRDELHINEDMDIHDSEKLEQRRQADLRRNLRSGLG
NLPQPKNEYQIVIQPPPEDNEEPDEKIEEDMSDRIAREKAAEEARLQALLRKRSKVLQRE
LPRPPMASLELIRDSLLRADGDKSSFVPPTSIEQADEMIRKELLALLEHDNAKYPLEEKP
SKEKKKGSKHPSKRSAASIPIIEDFEEDELKQADNLIKVEAQYIRVAMGHEDESHDEFIE
AHKTCINDLMYFPTRNAYGLSSVAGNMEKLAALQNEFEIVKTRLEAEREKALRLEKKVNV
LTQGYQIRAERQLLPPIEVTLKQMDTAGTELECFQALQRQEQLAASHRINGLWEEVQKQK
ELEQTLQRRYGDLVAELERIQQLIINYRALAIQEEIAAKNRALELAQATAKQAAILNTEP
SEPMPSDELGSSLPVGLSDEKTSDQQMDIDSEKVHSAQATDTSLTNNVPSEPVPSDELGS
SLPVGSSDEKVSDQQMDVDSEKVHSAPATDTSFTNNVPSDEVRTTLVQGSGHEASGTCPS
GSDINNQNGVPVPTGDSINRGDIISKVGVAVGNKVNDDSAGVDAGDAVIITEVMKDSSAA
TEGESIQERVDGFATADVMQVSSGGDDKVNQMKDEGKLPVIVVDLTSSE
NT seq 3210 nt   +upstreamnt  +downstreamnt
atgaggatcatgataaaaggtggagtatggaagaacacggaggatgaaattctaaaagcg
gctgttatgaaatatggcaaaaaccaatgggctcgtatttcttctcttcttgttcgtaaa
tctgctaagcaatgtaaagctcgttggtatgagtggcttgatccttccattaaaaagacc
gagtggactagagaagaggatgagaaattgcttcatcttgctaagctcatgcccacgcag
tggaggacgattgccccgattgttggacgtactccttcacaatgccttgagcgttacgag
aagctgcttgatgcagcttgtgttaaggatgacaactatgatcctggtgatgatccacgg
aagttgcgtcctggtgagattgatccgaacccagaatctaagcctgcacgtccggatcct
gttgatatggatgaggatgagaaggagatgctttcggaagcacgagctaggttagcaaat
acgaaaggtaaaaaggctaaaagaaaggctagggagaaacagcttgaagaagcgaggagg
cttgcttccttgcagaaaaggagggaactgaaggctgctggtattgataataggcatcgg
agaaggaaaaggaaggggatagactataattctgaaattccctttgagaagagacctcct
cctggattttatgatgttgctgatgaagatagacctgtggaacagcctaagttcccgacc
actattgaagaaattgaagggaaaaaaaggatggatattgaagcacagttaagaaagcag
gatgctgcaaagaataaaattgctgaaaggcaagatgccccatcagctattctacaagca
aacaagctgaatgatccagaaacggttaggaagaggtcaaaattgatgcttcctgcacca
cagatttcagatcatgaattggaggacattgcgaagatggggtatgctagtgatcttctt
gcaggaagcgaggaactcatggaagggagcggtgcaacacgtgctcttttagcaaactat
gcccaaacaccacggcaaggaatgacacctctacggacccctcaaagaactcctgctggt
aaaggtgacgctataatgatggaagctgaaaacctagcacggttgagggagtcacaaaca
ccattattaggaggagagaatcctgatttgcacccttcagatttttctggagtcacccct
aagaaacgggagattcagacgccaaacccaatgctgactccttctgcaactcctggcggt
gttggtctgactcccagaattggtatgacaccatcaagggattcttttgggatcacccca
aaaggaactcccatcagggatgaactccatataaatgaagatatggatatacatgatagt
gaaaaacttgagcaacgaagacaggctgatctgagaagaaatctgcgttctggtcttggt
aatcttccacagcccaagaatgaataccagatagtcatccaaccgcctccagaagacaat
gaagaaccagatgagaagattgaagaggatatgtctgatagaatagcgagggaaaaagct
gcggaagaagcccggctgcaggcattacttaggaagagatcaaaagtactgcaaagggaa
ctccctcggcctcctatggcatcattggaattaattagagattctttgctgagagctgat
ggggataagagttcctttgttcctcctacatcaattgaacaggctgacgaaatgataaga
aaggagcttttagccttactagaacatgataatgcaaagtatccacttgaagagaagcca
agcaaggagaaaaagaaaggctccaagcacccttcaaaaagatctgctgcttctatccct
atcatagaggactttgaagaagatgagctgaaacaagctgataatttgataaaagtggaa
gctcagtacatacgtgtagctatgggacatgaagatgaatcccatgatgaatttattgaa
gcacacaaaacatgcataaatgacctcatgtacttccccactcgcaatgcttatggtctc
tccagtgttgctggaaacatggagaaactcgcggcattgcagaatgaatttgagattgtg
aaaacaaggttagaggctgaaagggagaaggcattacggcttgagaagaaggtcaatgtt
ctcactcaaggttatcagatacgggcagaaaggcaacttttgcctccaattgaggtgacc
ttaaagcagatggacaccgctggaacagaactggagtgcttccaagctttgcagaggcaa
gagcaattagcagcatcacacaggatcaatggtctttgggaggaagttcagaagcaaaag
gagctagagcaaactttgcaaaggagatatggagatcttgttgctgagctagaaaggata
caacagctcataattaattacagagcactagccatacaagaagaaattgctgcaaagaat
cgtgcccttgagttggcccaagccacagcaaagcaagctgccatactgaacactgaaccg
tctgagcctatgccttccgatgaacttggaagttctttgccagtaggtttatctgatgaa
aaaacttcggatcagcaaatggatattgattcagagaaggtgcacagtgcacaggccaca
gatacaagcttgaccaacaatgtgccttctgagcctgtgccttcagatgaacttggaagt
tctttgccagttggttcatctgatgaaaaagtttcagatcagcaaatggatgttgattca
gagaaggtgcacagtgcaccggccacagatacaagctttaccaacaatgtgccttctgat
gaggtgcggacaacacttgtacaaggtagcggccatgaagcttctggtacttgtccctct
ggttcagatataaataaccaaaatggagttccagttccaacaggggactcaataaacaga
ggagatattatatctaaagttggcgttgcagtggggaataaggtgaatgatgattctgct
ggcgtggatgctggtgatgctgttataattacagaagttatgaaggacagctcagctgcc
actgaaggagagagtatacaagaaagagttgatggctttgccactgctgatgtgatgcag
gtttccagtggcggagatgataaagtaaatcaaatgaaggatgaaggaaaattgcctgtc
attgttgtggatcttactagctctgaatag

DBGET integrated database retrieval system