KEGG   Populus nigra (Lombardy poplar): 133669498
Entry
133669498         CDS       T10372                                 
Name
(RefSeq) flap endonuclease 1 isoform X1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03030  DNA replication
pnz03410  Base excision repair
pnz03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    133669498
   03410 Base excision repair
    133669498
   03450 Non-homologous end-joining
    133669498
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pnz03032]
    133669498
   03400 DNA repair and recombination proteins [BR:pnz03400]
    133669498
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pnz04147]
    133669498
DNA replication proteins [BR:pnz03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    133669498
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     133669498
DNA repair and recombination proteins [BR:pnz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     133669498
Exosome [BR:pnz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   133669498
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc 5_3_exonuc_N HHH_5 PM2_P3
Other DBs
NCBI-GeneID: 133669498
NCBI-ProteinID: XP_061945645
LinkDB
Position
12:complement(83397..90821)
AA seq 417 aa
MGIKGLTKLLADNAPKAMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE
VTSHLQGMFNRTIRLLEAGIKPLYVFDGKPPDLKKQELAKRYSKRADATEDLAAAVESGV
KEDIEKFSKRTVKVTKQHNDDCKRLLKLMGVPVIEAPSEAEAQCAMLCKSGKVYAVASED
MDSLTFGAPRFLRHLMDPSSRKIPVMEFEIPKILEGLNLSMDQFIDLCILSGCDYCDSIR
GIGGQTALKLIRQHGSIESILENINKERYQIPEDWPYQEARQLFKEPAVLTDEEQLDVKW
TSPDEEGLITFLVNENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPVANTSQPVKRKG
TKCVLRPPKPAIKLKMLSLQVCSYTSVPKTIGSLSMLTLNLFSKHSTTSPRGVCFSA
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgggtatcaagggtttaacaaagctgttggcggataatgctccaaaagctatgaaagag
cagaaattcgagagctacttcggtcgtaaaattgctatcgatgccagcatgagcatctac
cagttccttattgtagttggaagaagtggaactgaaatgctgactaatgaggctggtgaa
gtcaccagtcacttgcaaggcatgtttaatcgcactattaggcttctcgaggctggaatc
aagcccctctatgtctttgacgggaagcctccagatttaaaaaaacaggagcttgctaag
cgatactcaaagcgtgctgatgctactgaggatttggctgcagctgtcgagtctggtgtt
aaggaagatattgagaaattcagtaaacggacagtcaaggtgacaaagcagcacaatgat
gactgcaaaagacttttaaaactcatgggagtgcctgtaattgaggctccttctgaagca
gaagcacagtgtgctatgctttgcaaatcaggaaaggtctacgctgtggcttctgaagac
atggattcccttacttttggagcccctagatttcttcgccatttgatggatcccagctca
aggaaaatcccggttatggaatttgaaattccaaagatcttggaggggctaaaccttagc
atggatcaattcattgacctgtgcatcctttctggttgtgattattgtgacagcattcga
ggaattggaggacagactgccttgaaactcatccgacaacacggttctatagagagcata
ctagagaacataaacaaagaaaggtaccaaataccagaggattggccatatcaggaggct
cgacagctttttaaagaaccagctgtccttactgatgaagagcaacttgatgtcaagtgg
acttccccagatgaagaaggtttgattacttttctggtgaatgaaaatgggttcaacagt
gacagggtgacgaaggcaatagagaaaatcaaagctgccaagaacaagtcctcacagggc
cgattggaatcattttttaagccagttgccaacacatctcaacctgttaagcggaagggt
accaagtgtgttcttcgtcctcctaaaccagcaatcaagcttaaaatgctctctctgcaa
gtctgtagttatacttctgtgcccaagaccattggcagtcttagcatgctgacactgaat
ctgttttcgaagcactccacaacatcacccagaggtgtctgcttcagcgcttga

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