Populus nigra (Lombardy poplar): 133669720
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Entry
133669720 CDS
T10372
Name
(RefSeq) protein HASTY 1 isoform X1
KO
K14289
exportin-5
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133669720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnz03016
]
133669720
03036 Chromosome and associated proteins [BR:
pnz03036
]
133669720
Transfer RNA biogenesis [BR:
pnz03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
133669720
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
133669720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
133669720
NCBI-ProteinID:
XP_061945938
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Position
12:complement(2114855..2125316)
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AA seq
1208 aa
AA seq
DB search
MEESNSNNHIANNVARAIAAALDWNSTPDARKAAVSFLESIKAGDVRILASSSFVLVKKE
WSSEIRLHAFKMLQHLVRLRWEELSPTERRNFANAAVELMAEIANSCEEWVLKSQTAALV
AEIVRREGLELWKELLPSLVSLSSQGPIQAELVSMTLRWLPEDITVHNEDLEGDRRRLLL
RGLTQSLPEMLPLLYTLLERHFGAALSEVGRQQLDIAKQHAATVTATLNAVNAYAEWAPL
QDLAKYGIIYGCGVMLSSPDFRLHACEFFKLVSQRKRPADASASEFDSAMRNIFQIMMNV
SRDILYKTGSSAGVMDESEFEFAEYICESMVSLGSFNFQCISGDNTILSLYLQQMLGFFQ
HFKLALHYQSLLFWLVLMRDLMSKPKVTAYSADGSAFNSAGSSAGQVDDEKRRTVSLVDD
DICVVILDISFQRLLKKEKVFSGNSFSPGTLELWSDDFEGKGDFGQYRSKLTELMRLVAS
FKPLIAGAKISERILSIIKSIPNSQIPVQDLAVMESMQVALENVVNAVFDGSNGYMAVSS
EVHLALCRVFEDLLQQLLSLKWTEPTLVEILGHYLDALGPFLKYFPDAVGGVINKLFELL
MSIPFVVKDPSVSSARHARLQICTSFIRIAKSADKSVLPHMKGIADTMAYMQREGSLLRG
EHNLLGEAFLVMASAAGTQQQQEVLAWLLEPLSQQWTQLEWQNNYLSEPLGLIRLCSETA
FMWSIFHTVTFFEKALKRSGIRKGSLNLQSISTASTIHPMASHLSWMLPPLLKLLRAVHS
LWSPSISQMLPGDIKAAMTMGNAERYSLLGEGNPKLSKGSLTFIDGSHIDTSREGHTETN
EADIRNWLKGIRDSGYNVLGLSMTIGDPFFKCLDVHSVGVALLENIQSMEFRHTRQLVHS
ALIPLVKHCPMEMWEVWLEKLLHPLFIHVQQALTFSWSSLLHEGKAKVPDVLGILAEADL
KAEVMEEKLLRDLTREMCVLLSTIASPGLNTGLPTLEQSGHAIRVDASSLKELDAFASNS
MVGFLLKHNGLAVPALQICLEAFTWTDGEAVSKVLSFCASVILLAISANNVQLREFVSKD
LFSAIIKGLALESNAFISADLVGFCREIFMHLCDRDPAPRQVLLSLPCIKPQDLVAFEEA
LTKTASPKEQKQHMKSLLLLATGNMLKALAAQKSVNIITNVTMRPRSSVNAPETRIDEGD
TIGLAAIL
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggaagagagtaatagcaataaccacatagcaaacaatgtggctcgagcaattgctgct
gctcttgactggaactctactcctgatgctcgcaaagctgctgtgtctttccttgaatcc
atcaaggcaggagatgtacgaattttggccagctcatcattcgttcttgtcaaaaaggag
tggtcttcagaaattcggttgcatgctttcaaaatgctgcagcatttggtaaggttgcga
tgggaggaattgagcccaacagaacgcaggaactttgcgaatgctgctgttgagttgatg
gctgaaattgcaaattcctgtgaagaatgggtgctgaaaagtcagacagctgcccttgtt
gccgagattgtcagaagagaaggcttagaactgtggaaagaactgcttccatctctggtt
tccctatctagtcagggccccatacaagctgagttggtttcgatgacactgaggtggctt
cctgaagatattacagttcacaatgaagatttagaaggtgatcggcgtaggttattgttg
cgagggcttactcagtcattgcctgaaatgctgccactactatacaccttacttgagaga
cattttggagctgcattgagcgaagtagggaggcagcaactggacatcgcaaaacagcat
gcagcaacagtaacagcgactttgaatgctgtcaacgcttatgctgagtgggcgcctttg
caggatctagccaaatatggcataatttatggctgtggtgtcatgctctcttctcctgac
tttcgtcttcatgcctgtgaatttttcaaactcgtctcacaaaggaagagacctgccgat
gcctctgcttctgaatttgattctgcaatgcgtaatatctttcagatcatgatgaatgtc
tcaagagatattttgtacaaaactggctcaagtgctggagtcatggatgagagtgaattt
gagtttgcagaatatatatgcgagagcatggtgtctttgggttcttttaactttcaatgc
atttctggtgacaacactatactctctctttatttacagcagatgctgggcttttttcaa
cattttaagctagctcttcattatcaatccctgctattttggctggtgctaatgagagat
ttaatgtcaaagccgaaagttactgcatattcagcagacgggtctgcttttaacagtgca
ggctctagtgctggacaggttgatgatgaaaaaaggaggactgtaagccttgtggatgat
gatatttgtgttgtaattctggatatctctttccagcgcttgcttaagaaagaaaaggtt
ttctctgggaattccttttctcctggaacattggagttgtggagtgatgattttgaaggc
aagggtgactttggccaatatcgttccaagctgaccgagctgatgagacttgttgcttct
tttaagcccctaatagctggtgctaaaatctctgaaagaattctttcaatcattaagagc
attccaaattctcaaatacctgttcaggacttagctgtgatggaaagcatgcaagtggct
ttagaaaatgttgtcaatgcagtttttgatggatcaaatggctatatggcggtcagttcg
gaagttcacctcgcgttgtgtagagtttttgaagatttacttcagcaactcctttctttg
aaatggacggagccaactcttgtggaaatcctagggcactatttagacgcgctgggtcca
tttttgaagtatttcccagatgcggttggtggtgtcattaataaattattcgagcttcta
atgtcaatcccatttgttgttaaggatccttcagtaagcagtgcacgccatgcaaggtta
cagatttgtacgtcatttattcgaatagccaaatctgctgacaaaagtgttctacctcat
atgaaaggaatagctgataccatggcatatatgcaaagagagggctctctgcttcgtggt
gaacataatctgctaggtgaagcatttcttgttatggcttcagctgccgggactcaacaa
cagcaagaagttttggcctggttgcttgaacctttgagccaacagtggacacagctagag
tggcaaaataattatttgtctgagccactaggtttgatccgtttgtgctctgagacagca
ttcatgtggtcaattttccacactgtgacattctttgagaaggcacttaagaggagtgga
atcagaaaaggcagtctgaatttgcaaagcatctcaacagcaagtactatacatccaatg
gcttctcatctgtcctggatgctgccacccctcttgaaacttcttcgtgctgtgcactca
ctttggtctccatccatatctcaaatgttacctggagatatcaaagctgccatgaccatg
ggcaatgctgaacgatatagtctccttggggaaggaaaccccaaattgtccaaaggttcc
ttaaccttcatagatggatctcatattgatacaagtagggaaggacacaccgaaacaaat
gaagctgatatacggaattggttgaaaggtatcagagatagtggatacaatgtattgggc
ctatcgatgaccattggtgatccattttttaaatgtttggatgttcattctgttggtgtg
gcactactggaaaacatacagtcaatggagttcagacatacaaggcagcttgtccattca
gctttgatacctttggttaaacattgtcccatggaaatgtgggaggtctggctggaaaag
ctcttgcatccattatttatccatgtacagcaagctcttaccttttcttggtccagtctc
ctgcatgagggtaaagcaaaggtcccagatgtccttggcatccttgctgaggcagacttg
aaagcagaagtaatggaagagaaactgcttcgagacctaactcgtgagatgtgcgttctt
ctctctacaatagcttcgcccggactaaatacagggcttcctactttagaacaatctggc
catgctatccgtgtggatgcatcttctttgaaggaattggacgcatttgcatcaaactct
atggttggttttcttttgaagcacaatggcttggctgttccagcattacagatttgttta
gaagctttcacatggacagatggtgaagcagtatcaaaagttttgtccttttgtgctagt
gtgattcttctagcaatctcagctaataatgttcaactcagagagtttgtttctaaagat
ctgttctctgcaattatcaaaggtttggcgctcgagtcaaatgcatttatcagtgctgat
ctagttggtttctgtcgagaaatattcatgcatctctgtgatagagatccagctccaagg
caggttctgctttctctcccttgtattaaaccccaggatttggttgcctttgaagaagct
ttgaccaagacagctagccctaaggaacaaaagcaacatatgaagagcttgcttttatta
gctactggaaacatgctaaaagcgctagctgctcagaagagtgtaaacattatcacaaat
gttacaatgaggcctcgcagctcggtaaatgctccagaaaccagaattgatgagggggat
actataggattggcagccattttgtga
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integrated database retrieval system
