Populus nigra (Lombardy poplar): 133669764
Help
Entry
133669764 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133669764
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
Enzymes [BR:
pnz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
133669764
Transfer RNA biogenesis [BR:
pnz03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
133669764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133669764
NCBI-ProteinID:
XP_061946018
LinkDB
All DBs
Position
12:complement(11902048..11907751)
Genome browser
AA seq
625 aa
AA seq
DB search
MEDIEDLLIGNGSGSPPGFRLPLNAVGVNLKKNKNKPQLHAKQLSETPISSKIPGTQTIY
IKTFGCSHNQSDSEYMAGQLSSFGYSLSDSPEEADLWLINTCTVKSPSQSAMDTLISKGK
SAKKPLVVAGCVPQGSRNVKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLNRKTLPAL
DLPKVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVDSLAGRVKTVIDDGVKEIW
LSSEDTGAYGRDIGVNLPILLNAIVAELPSDGSTMLRIGMTNPPFILEHLKEIAEVLRHP
CVYSFLHVPVQSGSDVILTAMNREYTVNEFRTVVDTLTELVPGMQIATDIICGFPGETDK
DFSQTVNLIKAYKFAQVHISQFYPRPGTPAARMKKVPSNIVKQRSRELTSVFEAFTPYNG
MEGRVERIWITDIATDGIHLVGHTKAYVQVLIVAQESMLGTSAIVKITSVGRWSVFGEVI
ETLYQINQKSKSVKKMRSEEKCSPCSDPYDSCACSGESEPCACGPESCGGQSTLEQSGVL
QNEVLREDQNRRNLVGWLLRKRKNQAQKMVENGIASGSQKKQEWAKGAPEEWGVVDRALL
GGLIVSVFTTVALLILLGFKTMSSK
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggaagacattgaagatttgctgattggtaatggaagtgggtctcctcctggattcagg
ttgccactgaacgcagttggagtaaacctcaagaagaacaagaataagccgcaactgcat
gccaagcaactttctgaaacccctatctcttccaagattcctggcactcagacaatatat
atcaagacttttggatgctcccataatcagagtgatagtgaatatatggccggacaactt
tcatcatttggttattcattaagtgatagtcctgaggaggcagacctgtggctgatcaat
acatgcactgtaaaatcaccaagtcaatctgccatggacactctaatatcaaagggtaaa
agtgcaaaaaaaccacttgtggtggctgggtgtgtacctcaaggaagtcggaacgtgaaa
gaattagaaggagtcagtatagttggagtccagcaaatagatcgtgtagttgaagttgta
gaggagactttaaaaggtcatgaagtgcggcttttgaaccgcaagacattgccagcactt
gacctccccaaggtgcgaaagaacaaatttgttgagattcttcccattaatgttgggtgt
ttgggggcctgtacttattgcaagacaaagcatgcccgtgggcatttagggagctacact
gtcgatagccttgcagggcgtgtaaaaacagttatagatgatggagtaaaggaaatatgg
ttgagtagtgaagatacaggagcttatggtcgcgacattggggttaatctcccaatttta
ttgaatgctattgttgctgaacttccttctgatggaagcacaatgcttcgaattgggatg
acaaatccaccttttattctggagcacctgaaagagatagcagaagttctgcgccatcca
tgtgtatactcctttcttcacgtgccagtgcagtctggtagtgatgtcattttgactgca
atgaatcgagaatacactgtgaatgaattcaggactgtggttgataccttgactgagcta
gttccggggatgcagattgcaactgatataatatgtggattccctggtgaaacagataaa
gatttttctcaaactgtcaaccttattaaagcgtacaagtttgctcaagttcatatctcg
cagttctatcctagaccagggacacctgctgcaaggatgaagaaggttccaagtaacata
gtgaagcaaagaagccgtgaattgacttctgtgtttgaagctttcactccttacaatgga
atggagggcagagtggaaagaatatggataacagatatcgccactgatggaattcacttg
gttggccacacaaaagcatacgtgcaggtgctcatagttgctcaagaaagcatgctgggt
acttcagctattgttaagataacctccgttggaaggtggtcagtttttggagaagtgatt
gagactctctaccaaataaatcagaaatccaagtccgtcaagaaaatgcgcagcgaggaa
aaatgttctccctgttccgacccatatgacagctgtgcatgttccggagagtcagaacct
tgtgcttgtggaccagagagctgtggaggacagagtactttagaacaaagtggtgttttg
cagaatgaagtgcttcgagaagatcaaaatagaagaaatctcgttggatggttactaaga
aagcggaaaaatcaggcacagaaaatggtggagaatggtatcgcgtcgggatcccagaaa
aagcaagaatgggccaaaggagctccggaggagtggggtgttgtggatagggcactccta
ggaggattaattgtcagcgtttttactactgtagctttactaatacttctgggatttaag
accatgtcatccaagtga
DBGET
integrated database retrieval system
