Populus nigra (Lombardy poplar): 133669883 Help Entry 133669883         CDS       T10372                                  Name (RefSeq) vacuolar sorting protein 18   KO K20181   vacuolar protein sorting-associated protein 18 Organism pnz  Populus nigra (Lombardy poplar) Pathway pnz04148   Efferocytosis Brite KEGG Orthology (KO) [BR:pnz00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     133669883  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pnz04131]     133669883 Membrane trafficking [BR:pnz04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     133669883    Hops complex     133669883 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pep3_Vps18 Clathrin VPS18_RING_C zf-RING_Vps41 zf_RING_Vps8 zf-RING_11 RPN1_RPN2_N zf-rbx1 TXNDC16_2nd zf-RING_2 Nup54_57_C zf-C3HC4 Motif Other DBs NCBI-GeneID:  133669883 NCBI-ProteinID:  XP_061946195 LinkDB All DBs Position 12:14825953..14837161 Genome browser AA seq 988 aa AA seqDB search MDQSRQVFTVDLLERYASKGRGVITCMAAGNDVILLGTSKGWLIRHDFGAGGSSDFDLSS GRPGDQSIHRVFVDPGGSHCIATVIGGGGAETFYMHAKWSKPRVLGRLKGLIVNAVAWNR QLITEASTKEVIIGTDNGQLFEMAVDEKDKREKYIKFLFELKELPEAFMALQMETASLSN VTRYYVMAVTPTRLYSFTGIGLLETVFASYLERAVHFMELPGEIPNSELHFFIKQRRAMH FAWLSGAGIYHGGLNFGAQHSYINGDENFVENKALLDYSKLSDGVDAVKPSSMAVSEFHF LLLIGNKVKVVNRISEQIIEELQFDQTSESVSSGVIGLCSDATAGLFYAYDQNSIFQVSV NDEGRDMWKVYLDMKEYAAALANCRDPLQRDQVYLVQADAAFTSRDFLRAASFYAKINYI LSFEEVTLKFISVGEQDALRTFLLRKLDNLAKDDKCQITMISTWATELYLDKINRLLLEE DNALDKHSSEYQSINQEFRAFLGDCKDVLDEATTMRLLESYGRVEELVYFASLKEQYEIV IHHYVQQGETKKALEVLQKPAVPIDLQYKFAPDLIVLDAYETVESWMTTKNLNPRKLIPA MMRYSSEPHAKNETHEVIKYLEFCVHCLHNEDPGVHNLLLSLYAKQEDDDALLRFLQCKF GKGRENGPDFFYDPKYALRLCLKEKRMRACVHIYSMMSMHEEAVALALQVDPELAMAEAD KVEDDEDLRKKLWLMVAKHVIEQEKGTKRENIRKAIAFLKETDGLLKIEDILPFFPDFAL IDDFKEAICSSLEDYNNQIEQLKEEMNDATHGADNIRNDISALAQRYAVIDRDEECGVCK RKILIVGGDYRMSRGYTSVGQMAPFYVFPCGHAFHVHCLIAHVTFSVNETQAEYILDLQK QLTLLGDGARKDMNGGITEDSITSMTPADKLRSQLDDAIASECPFCGELMIRQISLPFIL SEEAQLVNSWEIKPQNNLANMRTLSLPV NT seq 2967 nt NT seq  +upstreamnt  +downstreamnt atggatcaatcacggcaagtattcaccgtcgatctcctagaacggtatgcatcaaaaggc cgtggtgttatcacctgtatggcagcaggaaacgacgtcatcttattaggtaccagcaaa ggctggcttattcgacacgatttcggcgccggcggttcttccgattttgatctttctagt ggacggcctggcgatcaatctatacatagagtgtttgtggatcctggtggtagccactgt atcgccaccgttattggtggaggtggtgcggagacgttttatatgcatgctaaatggagt aagccacgtgtgcttgggaggttgaaaggtttgatcgttaatgctgttgcttggaatcgg caactgattactgaagcatctacgaaggaagttattattgggacggataatgggcagctg tttgagatggctgtagatgagaaagataagagggagaagtatataaagtttttgtttgaa ttaaaggaattgcctgaagctttcatggctttgcagatggaaacggctagcttaagcaat gtaaccagatattatgtgatggctgttactccaacacgactttattcttttactggaatt ggattattggagacagtttttgctagttacttggaacgcgcggtgcattttatggaactg ccaggggaaataccaaacagtgaattgcatttttttatcaagcaaagaagagcaatgcat tttgcatggctttctggagcaggtatctatcatggtggcttaaattttggagcgcagcat agttacataaatggtgatgagaattttgtggagaataaggctcttttggactattcaaaa ttaagtgatggtgttgatgcagttaaaccgagctcaatggcagtttctgaatttcatttc ttacttcttattggaaacaaggttaaggttgttaacagaatcagtgagcaaattatagag gagcttcagtttgaccaaacatcagaatcggtttcaagtggtgttatcggattatgcagt gatgccactgctggcttgttctatgcatatgaccaaaattctatttttcaggtgtctgtt aacgatgaagggagagatatgtggaaggtgtatctagacatgaaagaatatgctgcagct ttagcaaattgccgagaccctctccagagagaccaagtatatttagtgcaggcagatgct gctttcacctccagggattttctaagagcagcatcgttctatgcaaaaattaattacata ttatcatttgaggaagttacgttgaagtttattagtgtaggcgaacaggatgctttgcga actttcttgttgcggaagcttgataatcttgccaaggatgacaagtgccaaataacaatg atttccacatgggcaactgaattgtacttggataagataaatcggctactcttggaagag gataatgctttggacaaacatagttctgagtaccaatcaatcaatcaagagttccgtgct ttcctcggtgactgcaaggatgtcttggatgaggcaactactatgagacttctagagagc tatggcagggttgaagaactagtgtattttgctagtctgaaggaacagtatgaaattgta attcaccactatgttcagcaaggagaaacaaagaaagcattggaagtgcttcagaaacct gctgttccaatagaccttcagtacaagtttgccccagatctcattgttcttgatgcatat gaaacagttgagtcatggatgaccacaaaaaacctgaacccaagaaaactgattcctgca atgatgcgttattcaagtgaacctcatgcaaagaatgaaacccatgaagtcatcaaatat ttggaattctgtgttcattgtttgcataatgaggatcctggagttcacaacttgcttctt tctctctatgctaaacaggaagatgatgatgcacttttgcgtttcctacaatgcaagttt gggaaaggacgagaaaatggtccagatttcttctatgatcccaagtatgccttgcgcctt tgcctcaaagaaaagcggatgcgtgcctgtgttcacatatacagcatgatgtccatgcac gaagaagcagttgctcttgctctacaggttgaccccgagcttgcaatggctgaagctgac aaggtggaagatgacgaagatttgagaaagaagctttggcttatggttgccaagcatgtt attgaacaagaaaagggaactaaaagggagaatataaggaaggcaatagcatttctcaag gaaactgatggccttctaaagattgaggatatattaccgttctttccagactttgcccta attgatgacttcaaggaggcaatttgctcatcattggaggattacaacaaccaaattgaa caactaaaagaggagatgaatgatgctacacatggcgctgacaacataagaaatgatatt agtgcacttgctcaaagatatgctgtcattgaccgcgacgaggaatgtggggtttgtaag cgcaaaatcttgattgtgggtggggactaccgtatgtctcggggctatacatcagtagga caaatggctcccttctatgtatttccatgtgggcatgcctttcatgtgcattgcttgatc gcccatgtgacattttctgtcaatgaaactcaagcagaatatatactggatctgcagaag cagcttacgttgcttggtgacggagcgaggaaagacatgaatggtggcataactgaggat tccattactagcatgactcctgcagataagctccgttctcagctggatgatgcaatagca agcgaatgtccattttgtggtgaattgatgatccgtcagatctctttgccttttatactc tctgaagaagcacagctggttaattcatgggagataaaaccacaaaacaaccttgcgaac atgaggaccctctctttaccggtatga

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