Populus nigra (Lombardy poplar): 133669989
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Entry
133669989 CDS
T10372
Name
(RefSeq) cell division control protein 48 homolog C
KO
K14571
ribosome biogenesis ATPase
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
133669989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pnz03009
]
133669989
Ribosome biogenesis [BR:
pnz03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
133669989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_14
AAA_22
AAA_16
TIP49
AAA_2
RNA_helicase
AAA_28
AAA_18
nSTAND3
AAA_17
AAA_33
Vps4_C
Mg_chelatase
Rad17
IstB_IS21
Viral_helicase1
NPHP3_N
AAA_25
Bac_DnaA
ATPase_2
TsaE
AAA_3
NACHT
NB-ARC
AAA_11
ABC_tran
Parvo_NS1
AAA_24
AAA_7
ATPase
Nucleolin_bd
Cytidylate_kin2
TTC3_9th
Trimer_CC
CC_Liprin_beta
Motif
Other DBs
NCBI-GeneID:
133669989
NCBI-ProteinID:
XP_061946350
LinkDB
All DBs
Position
12:complement(15190589..15195711)
Genome browser
AA seq
821 aa
AA seq
DB search
MGSGRRRSGGGGGGSGGGRNQRLLKHHIDTCNKKFTTTDDIVHHLRNSYPNYRRMELKTL
TRLVQQTQNQQTPPPKKFRKHELETESDSDDEEANLSTTVSKKQKRIDESEEKLMQIENA
YSRRRSRNRGPILVSSSDTESSSESDSDSSTSLEPPKFDLMKSMLRESYGVAEKNMEVEL
ANDRKESITSKVDMIQRNRGVGKRKGEDLEGSLGKLKGGLGEDAKGKEGGPRFKDLGGLS
GILEELEMEVFLPLYHPNVPLRLGVSPISGILLHGPPGCGKTKLAHAIANETGVPFYKIS
ATEVVSGVSGASEENIRDLFSKAYRTAPSIIFIDEIDAIASKRENLQREMERRIVTQLMT
CMDEHHRLGQSSDDSSSSESSNRIPGNVLVIGATNRPDAVDPALRRPGRFDREINLGVPD
EKARVQILSVLTKNCTLEGSLDILQIARSTPGFVGADLNALVNTAGNLAMRRVASRRKSE
LSGQLTEKEDNEDWWKQPWSPEEMEKLAITMADFEKAAKLVQPSSKREGFSTIPNVKWED
VGGLDDIRDEFDLYIISRIKYPDDYQKFGVNLETGILLYGPPGCGKTMIAKAAANEAGAN
FIHVKGPELLNKYVGESELAVRTLFSRARTCSPCIIFFDEVDALTTMRGKEGGWVVERLL
NQLLIELDGADQRPGIFIIGATNRPEVMDPAVLRPGRFGKLLYVPLPSSEDRGLILKALA
KGKPIDPSVDLAAIGQMEACKNFSGADLRKLMEEAAMTALKEAKRQRCLNETSVTITAAQ
NEPAVNITATHFEQALGKISPSVSEKQIQYYKAWSESFKAT
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcggaagaagaagaagcggcggtggtggcgggggaagcgggggaggaagaaac
caaagactgcttaaacaccacatagacacctgtaacaaaaaattcaccacaacagacgac
atagtccaccacctccgcaatagctaccccaattaccgccgcatggaactcaaaacccta
actcgcctcgtccagcaaacccaaaaccaacaaacaccgccgccgaagaaattcagaaaa
catgaattggaaacagaatccgattccgacgacgaagaagcaaaccttagcacgactgtg
agtaagaagcagaagcgaattgatgagagtgaagagaaattgatgcagattgaaaatgcg
tattctagaagaaggagtcgaaatcggggcccgattttggtttcgagttcggatacggag
tccagttcggagtcggattcggattcttcgacgtcattagagccaccgaagtttgatttg
atgaaatcaatgttaagggaaagttatggagtggcggagaaaaatatggaagttgagctt
gctaatgatagaaaagaaagtattactagtaaagttgacatgattcagagaaatagaggg
gtaggaaagcgaaaaggagaggacttggagggtagtttggggaaactgaaaggtgggctt
ggtgaggatgcgaaggggaaggaaggggggccgaggtttaaggatttagggggtttgagt
gggattttagaggagttggaaatggaggtgtttttgccattgtatcatccaaatgtgccg
ctgagacttggggttagtcctataagtgggattttgttacatgggccacctgggtgtggg
aagactaagttggctcatgctattgcgaatgagactggggtgcctttttacaagatttct
gctactgaggttgtttctggtgtttcaggtgcatcagaagaaaatatccgagatcttttc
tctaaagcatacaggactgcaccatctatcatttttattgatgagattgatgcaattgct
tcaaagagagagaatttacagagagagatggagagaaggattgtgacacaattgatgact
tgcatggatgaacatcacaggctaggacagtcatctgatgacagttcaagttcagaaagc
tccaatcgaatacctggaaatgttcttgttattggagctacaaataggcctgacgctgtt
gaccctgcactaaggaggcctgggagatttgatcgcgagattaatttaggtgttccggat
gagaaagctagggttcaaattctttcagtgcttactaaaaattgtactcttgagggttct
cttgatattttgcaaatagctaggtctacaccaggttttgttggagctgatttgaatgct
ttggttaacacggctggtaatcttgcaatgaggagagttgcttccaggagaaaatctgag
ctatcaggacaattgacagagaaggaagacaatgaggattggtggaagcaaccttggtcg
cctgaggagatggaaaagcttgccatcacaatggctgatttcgagaaagcagccaagcta
gttcagccctcatcgaaaagagaaggattctctactatccctaatgtcaaatgggaagat
gtcggtggccttgatgatataagggatgagtttgacctctatatcattagtcgtataaag
tatcctgatgattatcagaaatttggagtgaatttagagacagggattttgctctacgga
cctcctggctgtggcaaaacaatgatcgctaaggctgctgctaacgaggcaggagctaac
ttcattcatgtgaagggtcctgaacttctgaataagtatgttggagaaagcgaactggct
gtcaggacgttattcagtcgtgcaagaacgtgctcgccatgcataatcttcttcgatgag
gtggatgctttgacaacaatgcgtggaaaagaaggggggtgggtcgttgagaggctctta
aatcagttgcttatagagttagatggtgcagatcagcgccctggtatttttatcattggt
gccactaacagacctgaggtgatggaccctgctgtcctgcggcctggtaggtttggcaaa
cttctttatgtccctctgccaagttcagaggaccgtggattgatcttaaaggctctcgct
aaaggaaaacctattgatcctagtgtcgacttggctgccatcggtcaaatggaggcttgt
aaaaattttagcggggctgatcttaggaagctgatggaggaagccgcaatgactgctttg
aaggaggccaagagacaaagatgtttgaatgagacttcagtaacaatcacggccgcacaa
aatgagccagcagttaatatcacagccactcattttgagcaagcccttggtaaaatttca
ccatccgtgtcagagaagcaaatacaatattacaaagcttggtcagagagtttcaaagca
acatga
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