Populus nigra (Lombardy poplar): 133670043
Help
Entry
133670043 CDS
T10372
Name
(RefSeq) putative RING-type E3 ubiquitin transferase C3H69
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133670043
Enzymes [BR:
pnz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133670043
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133670043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
Torus
zf-CCCH
zf-CCCH_2
zf-CCCH_DUS3L
zf-C3HC4
zf-RING_2
zf-CCCH_RBM22
zf-CCCH_3
RING_XB3-XBAT31
zf-RING_5
zf-ANAPC11
zf-RING_UBOX
zf-CCCH_9
zf-CCCH_PARP12
zf-C3HC4_2
zf_Tbcl_2
FANCL_C
zf-rbx1
IBR_1
Motif
Other DBs
NCBI-GeneID:
133670043
NCBI-ProteinID:
XP_061946434
LinkDB
All DBs
Position
1:complement(22233316..22240658)
Genome browser
AA seq
360 aa
AA seq
DB search
MSKRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTFYQKGICSYGSRCRYEHVKPSRPE
STASSSLTIPRQPLGSNSVSLALPARNVSNGVTTVPGVPPELSSRPFIAPTAPEWNLESA
QHDFLEDGEVIEPRNVKPADRSICSFAAAGSCPRGDKCPHIHGDLCAYCGKHCLHPFRPE
ERDEHLKACEKKQKNLDLLKYSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCI
RNWRSSSPTSGMDVNTSLRACPICRKLSYFVIPSVIWYSSKEEKQEIVDTYKAKLRSIDC
KHFDFGNGNCPFGTSCFYKHAYRDGRLEEVALRHLGADDGQTVIAKNIWLSDFLGSLQIR
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaagggtactttgcaagttttttgctcatggggcatgcttgaaaggggagcat
tgtgaattttcacatgattggaaagatcctccaaataatatttgcaccttttatcaaaaa
ggtatctgttcatatggtagtcgatgccgatatgaacatgttaaaccttctaggcctgaa
tctactgcatcatcttcgttgacaattcctcgtcaacctctgggctcaaattccgtgtcc
ctggcccttcctgcaagaaatgtatcgaatggggtgacaacagtaccaggtgttcctcca
gagctttcaagtagaccctttattgctcccactgcaccagaatggaatttggagtctgca
caacatgacttcttagaagatggtgaggttatagaacctaggaatgttaaaccagctgac
cgatctatctgttcatttgctgctgctggtagttgtcctcgtggagataaatgcccccat
attcacggtgacttgtgtgcctattgtggaaagcattgcttacaccctttcagacctgaa
gaaagagatgaacatttgaaagcatgcgagaagaagcaaaagaaccttgatttgttaaaa
tatagtcaagaaatagaatgcagtgtatgcctggatcgtgtgctttcaaagcccacggca
gctgaacgaaagtttggtctgctatcagaatgcgatcatccattctgcatatcatgtatt
aggaactggcgtagtagttccccaacgtctggaatggatgtcaatacttcattgagggct
tgcccaatatgtcgcaagctttcatactttgtcattccaagcgttatttggtattcctct
aaagaggaaaaacaggaaattgttgatacctacaaggcaaaactcaggtcaatagattgt
aaacacttcgactttgggaatgggaactgcccatttggaaccagctgtttttacaagcat
gcatatcgagatggccgcttggaggaagttgctttacgtcatcttggagctgatgatgga
cagactgtgatagctaaaaatatctggctgtctgatttcctcggtagcttacaaataagg
tga
DBGET
integrated database retrieval system
