Populus nigra (Lombardy poplar): 133670367
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Entry
133670367 CDS
T10372
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 16
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
133670367
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pnz04040
]
133670367
Ion channels [BR:
pnz04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
133670367
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Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
133670367
NCBI-ProteinID:
XP_061946839
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Position
13:6659164..6663377
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AA seq
688 aa
AA seq
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MNNFRSYTSSHFRRLPKSLSIRRKVPWWDQIHDPGSEIVSKWNHIFLVACMIAMFLDPLY
FYLPIIGGDACMKIDIALGVWVTLARTFTDLFFFLHIFMKFRTAFVAPSSRVFGRGELVM
DPRAIAIRYLKSNFVVDLAAALPLPQIVIWFIITSVLKNPTAAHANHTVSLIVLIQYIPR
FFVMIPLNRRIVKTTGVIAKTAWSGAAYNLLLYVLASHVLGAIWYLASIQRQHHCWNIQC
KNERNRTPACISPFLDCSAKDNPARQAWLTTTNLLTNCDAQNDENFQFGMFAEAFTNHVA
EASFIDKYFYCLWWGLRNLSSYGQNLMTSTYEGETLFSIGICIMGLVLFAHLIGNMQTYM
QSASARLEEWRIRRRDTEEWMRHRQLPPELQERVRRFVQYKWLATRGVDEESILKSLPMD
IRRQIQRHLCLALVRRVPFFAQMDDQLLDAICERLVSSLNTKDTFIVREGDPVNEMLFII
RGQLESSTTNGGRSGFFNSITLRAGDFCGEELLTWALMPTSRLNLPVSTRTVKALSEVEA
FALRAVDLKFVAKQFKRLHSKKLQHAFRYYSHQWRTWGACYIQSAWRRYTRRKLQMELAR
QESLFYSQVMEGEVEYYYSDEGGDERPLVDHSNNGSHLGATMLASKFAANTRRGVGHQKL
PPPDDSTLEMPKFFKPEEPDFYAEHEDS
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgaataacttccgctcatacacctcatcacatttccgccgtttacccaaatccttgtct
attcgacgcaaagttccctggtgggaccaaattcatgaccctggaagtgaaattgttagc
aaatggaaccacattttccttgtcgcgtgcatgattgcaatgtttcttgaccctctttat
ttttaccttcccattatcggtggcgatgcctgcatgaagattgacattgccctaggcgtc
tgggttaccttagctcgcaccttcacggacttgttctttttcttgcacattttcatgaag
tttaggacagcttttgttgcaccaagctctcgcgtttttggtagaggagagcttgttatg
gaccctagagccattgccatacgctacctgaaatcgaactttgttgttgatcttgctgct
gcccttcctctccctcagattgtgatttggttcataattacatcagtgctgaaaaatccc
acagctgctcatgctaaccacactgtttctctaatagttctcatccaatacattcctcga
ttttttgttatgatacctctgaatcgacggattgttaagactactggtgttatagccaag
actgcgtggtccggggcagcttataatctccttctctatgtacttgctagccatgtttta
ggagctatatggtatctggcatcaattcagaggcagcatcactgctggaacatacaatgt
aaaaatgagaggaaccgcacaccagcttgcatctctccatttcttgactgtagtgctaag
gataaccctgcacgacaagcttggcttacaaccactaatctgctcacaaattgtgatgcc
caaaatgatgaaaattttcagtttgggatgtttgccgaagcctttacaaatcatgttgct
gaagcatctttcatagataaatatttctattgtctttggtggggcttaagaaacttaagt
tcgtatggacaaaatttgatgacaagtacctatgaaggtgaaacactattcagcattggc
atctgtattatgggtctagttctgtttgctcatctcataggcaatatgcagacatatatg
caatccgcgtctgctagattggaagaatggaggattaggcgaagagatacagaggaatgg
atgaggcaccgtcaattacctccagagttgcaagaacgtgttcgccgttttgttcaatac
aaatggttagctacgagaggtgtagacgaagaaagcatcttgaagtccttacctatggat
atccgacgtcagattcaacggcatctttgtctggcccttgttcgacgcgtcccatttttc
gcacaaatggatgatcaactgttagatgcaatatgtgaacgtcttgtctcatctttgaac
actaaagacaccttcatagtccgggagggtgatccagtaaatgagatgcttttcatcatt
agaggacagctagaaagttccacaacaaatgggggaaggtcaggttttttcaactcaatt
acactcagggctggtgacttttgtggggaggaattattgacatgggctctgatgccaacc
tctcgtctaaatttacctgtatccactcgaactgtcaaggctctctctgaagttgaggcc
tttgcacttagagcggttgacctaaagtttgtggcaaagcaatttaaacggttgcatagc
aagaaattgcagcatgctttcaggtattactctcatcagtggaggacgtggggagcttgc
tatatacaatctgcatggaggcgttatacaaggaggaaactacaaatggaattggctagg
caagaaagcttattttattctcaagttatggaaggtgaggttgaatattattacagtgat
gaaggaggagatgaaagaccattagtggatcattcaaacaatggttcgcatcttggagca
accatgcttgcttcaaaatttgctgcaaatacaaggagaggagttggccatcaaaagctt
cctccgccggatgattccaccttagaaatgcccaagttttttaaaccagaggaacctgat
ttctatgcagagcatgaagatagttga
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