Populus nigra (Lombardy poplar): 133670535
Help
Entry
133670535 CDS
T10372
Name
(RefSeq) truncated transcription factor CAULIFLOWER A-like
KO
K09264
MADS-box transcription factor, plant
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnz03000
]
133670535
Transcription factors [BR:
pnz03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
133670535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
K-box
SRF-TF
Fzo_mitofusin
Spectrin_Anc-1_2
Sec8_N
Mt_ATP-synt_B
TLN1-like_RS
FUT8_N_cat
Orbi_VP5
Baculo_PEP_C
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
133670535
NCBI-ProteinID:
XP_061947027
LinkDB
All DBs
Position
13:11641763..11648948
Genome browser
AA seq
255 aa
AA seq
DB search
MGRGRVQLKRIENNISRQVTFSKRRTGLLKKAHEISVLCDADVAVIVFSTKGKLFEYSTD
SSMESILERYERCSYAEQQFVPHGPEHQGSWFLEHPKLRARVELLQRNLRNYTGQDLDPL
SYKELQHLEQKIDTALKSVRSRKNQLVHESLAEMQKKEKALQDQNNILVEQVKKKLKALT
EQAQWEQQNLGQNSSSFMPPQAQPPLQPSMLSHPPPTIGGSFQIRGFLNGNKDVEVQTQP
STMPHWMLRHVNDRI
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggggagaggtagggttcagttgaagaggatcgagaacaatattagcaggcaagtgaca
ttctccaagagaagaactggtttactaaagaaagctcatgagatctctgttctctgtgat
gctgatgtcgctgtgattgttttctctacaaaagggaagctctttgagtactccactgac
tccagcatggaatcgatccttgaaagatacgaaagatgctcgtatgcagagcagcagttt
gtaccacatggccctgaacatcagggaagctggtttttggagcacccaaagctcagggct
agggttgaactcttgcagagaaacctaaggaactatacaggacaagatttggacccttta
agttacaaagaacttcaacacctggagcaaaaaatagatactgctcttaagagcgtacga
tcaagaaagaaccaactcgtccacgaatcccttgcagaaatgcagaaaaaagaaaaggca
cttcaggaccagaacaacatactagtagaacaggtcaagaaaaaactgaaggcgctaact
gagcaagcacaatgggagcagcaaaaccttggccagaactcgtcctcttttatgccacca
caagcacaacctccactgcagccgtcgatgctatcacatcctccaccaactataggtggc
agtttccagattagaggattcctgaacggtaacaaggatgttgaagttcaaactcaacct
agcaccatgccacattggatgcttcgccatgtcaatgatagaatttga
DBGET
integrated database retrieval system
