Populus nigra (Lombardy poplar): 133670561
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Entry
133670561 CDS
T10372
Name
(RefSeq) LOW QUALITY PROTEIN: heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00900
Terpenoid backbone biosynthesis
pnz01100
Metabolic pathways
pnz01110
Biosynthesis of secondary metabolites
Module
pnz_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
133670561
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pnz01006
]
133670561
Enzymes [BR:
pnz01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
133670561
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
133670561
2.5.1.29 geranylgeranyl diphosphate synthase
133670561
Prenyltransferases [BR:
pnz01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
133670561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
PsiA
Motif
Other DBs
NCBI-GeneID:
133670561
NCBI-ProteinID:
XP_061947060
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All DBs
Position
13:13367405..13368621
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AA seq
314 aa
AA seq
DB search
MKFASSNLKQTNQAQEVPSLAFQFKEYMLTKLKQVNEALEEAVPLXTPLKIHEAMRYSLL
GNGKRMCPILCIASCELVGGDEELAMPLACALEMVHAMSLIHDDLPCMDNDDLRRGKPTN
HKVFGECIAILAGDALLSLAFEHIASKTKNVSPDCVVRAIAELGSAIGSRGVVAGQIVDI
DSEGKEVSMKTLEYIHVHKTAKLLEASAVCGAIMGGADDASIERLRKYARSIGLLYQVVD
DILDATKSSEELGKTAGKDLASNKATYPKLMGIDEAKKFAAELVEQAKKEIASFDSAKAV
PLFHLADYIVRRQS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgcaagctcgaatctgaagcaaacgaatcaagcccaagaggtcccttcactt
gcatttcagtttaaagaatacatgctcaccaagttgaagcaagtgaacgaagcactagaa
gaggcagtgcccttgncaacaccccttaaaatccatgaagcaatgagatattctctcctt
ggtaatggaaaacgaatgtgtccgattttatgcattgcttcatgtgagttggtcggagga
gatgaagaactagcgatgccattggcatgtgctctagagatggtgcatgcgatgtcacta
atccacgatgatcttccttgcatggacaatgatgatcttagacgaggcaaacccacaaac
cataaagtatttggtgaatgtattgcaattcttgcaggtgatgcactcctatcacttgct
tttgagcacatagctagcaagaccaagaacgtttcgccagactgcgtggttcgagccatt
gcggagcttggttcagctattgggtcaagaggtgtagtagcaggccagattgtggacatt
gatagtgaaggaaaagaagtaagcatgaagacgctagagtatattcatgtccataaaaca
gcaaagcttctagaggcatctgctgtttgtggggcaataatgggaggggcagatgatgca
agcattgaaaggcttagaaaatatgctaggtctattgggttgttgtatcaggtggtggat
gatatattagatgcaaccaagtcctcagaggagctaggaaagacagccgggaaggatttg
gcaagtaacaaggctacatatcccaagttgatgggcatagatgaggccaagaaatttgct
gctgagttggttgagcaagccaaaaaagaaattgctagctttgattctgccaaggctgtc
ccattgttccatttagctgactacattgttagacgacagagttag
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