Populus nigra (Lombardy poplar): 133670644
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Entry
133670644 CDS
T10372
Name
(RefSeq) DNA repair protein UVH3 isoform X1
KO
K10846
DNA excision repair protein ERCC-5
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03420
Nucleotide excision repair
Brite
DNA repair and recombination proteins [BR:
pnz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
133670644
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133670644
NCBI-ProteinID:
XP_061947178
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Position
13:complement(7586957..7598034)
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AA seq
1731 aa
AA seq
DB search
MGVQGLWDLLAPVGRRVSVETLAGKKLAIDASIWLVQFMKAMRDDKGEMVRNAHLLGFFR
RICKLLYLRTKPVFVFDGATPALKRRTVIARRRLRENAQAKIRKTAEKLLLNQLKSMRLK
ELAKDLEKQNAANKKGTQTKILEENKRVLSESEKLDEMLAASIAAEEGGSLDNNASTSAA
AAVEDMDSDGDGDEEMILPPMNEVEDPAVLAALPPLMQLDLLMRERSFAEKGKSNQDKQL
ENQNDKHKNNAKGKQILSDHTEFEGSNMGRDHVAAESYNQEKLDDMLAASMVAEEEGSDE
DEEMILPHGKVDPAVLAALPPSMQLDLLVQMREKLIAENRQRYQKVKKVPEKFSELQIQA
YLKTVAFRREIDQVQKAAAGNDVGGVQASRIASDANREFIFSSSFSGDKELLTTDGVKRR
KGHEQQKEPLKQPSSDFVAGVASICKSNTVTGFSQDESSSAFDDDVETYLDERGRMRVSR
VRAMGMRMTRDLQRNLDLMKEIEKDKTLSIKTPSARSVHNRNKIGTPRSFPNENHNGESS
HGIDGNSTNLNKMNEQSLLSNETSVQISFEVGDESKHFSSDDEVFASLVAEKPVKISSAG
NSTSRRYSDDSASDSDWEEGIVKGKANSSPNDVELRTKLSPKVSNVSDDSEVEWMEGDSD
IHDNSSYLAESKRKLVSKGTLEEEAALQDAIRRSLNDLVVGKFIQSQSNPENIKISGENV
SNDSEVEWVEVDPDVHDKSSYPAKSRNQVSGGSIEDEAGLQDAIMKSLNDLGSEKSIHSE
SDPKNVKSSRGHAYEGVGFLDQEDNGSAMLRKDATQQSKSISEILGFENLGDAGEVNISQ
AFPSVGSQLKSSKAHNPDDVVMLINESRESYVHSNPAWISQDVDKRENGCQGMPSIESIG
RLEAKENHLNLEPASDIENGGLSASHEKYSRDGSHTAIAASTYLPLTELIDDRNDKKAEP
STFIGGEKISSEAEPPCLSVENSFPEDSLNGSDFAEKLDGEKKAEDHVSERECYISKSAS
MDNENEQVNFTEASLEKEMLILDQEYSNLGDEQRKLERNAESVTSEMFAECQELLQMFGL
PYIIAPMEAEAQCAYMELANYVDGAVTDDSDVFLFGARNVYKNIFDDRKYVETYFMKDIE
KELGLSREKLIRMALLLGSDYTEGVSGIGIVNAIEVVTAFPEEDGLQKFRDWIESPDPAI
LGKFDVQTGLGARKKESKVGGSEAKCTGNGMEGTNPSGLNIPQAHEEKQSADHSQVIKQV
FMDKHRNVSKNWHIPSSFPSEAVISAYSCPQVDKSTEPFTWGKPDLHALHRLCWEKFGWH
IQKSDELLLPVLKEYNKHETQLRLEAFYSFNERFAKIRSKRIKKAVKGITGNQYSDMMDY
PVEEVSKSRTGNISGKSGDNEPQTHSKRTARTAPGNKSSFLEKSKPKWSRKRTAEQPVFP
EVENTEATVRQCSDRGFLRNGKGRGRGRGRGRGRGKANLCFEQSDSSSCDVDSGHDEHEV
HVDESRGPHELRKSTRLRKPVNYTVDDLEIDDVEKSLDQGDKEGFDKEALHQGFSSAKEA
RGDGGIGIKDNEQLEVGDSSLQSFSRDYLEGGDGFCFDGEEVGVPGVDQNSYFSKVELSD
DHLERGGGFCLDESDAGMDQGTNQNPPRTGDLLEEVEHGTELLNEVRDGGRTSACETELN
ADSVVAAAHAGGRLRSSVSGPEITKNETGATGGAGSLSAMPYLLKRKRRKM
NT seq
5196 nt
NT seq
+upstream
nt +downstream
nt
atgggagtccaaggtctgtgggacttgctggctcccgtcggccgtcgagtatccgtagaa
actctagccggcaagaaattagccatcgatgctagtatatggctggtccagttcatgaag
gcgatgagagacgacaagggagagatggtacggaacgctcatttgcttggcttctttcgt
cgaatttgtaagcttttgtatctccgcactaagcctgtcttcgtcttcgacggtgccacc
cctgctctcaagcgccgcaccgtcatcgctcgtcggaggctgcgagagaacgcccaggct
aagatccgcaaaaccgctgagaaattgcttcttaatcaactgaagtcaatgaggctgaaa
gaactggcaaaggatcttgagaagcagaatgctgctaataagaagggcacgcagacgaag
attttggaagagaataaacgtgtgctgtctgagtccgaaaagcttgatgaaatgctggca
gcgtccattgctgctgaggaaggtgggagtttagataacaatgcatccacatctgctgct
gctgctgtggaggacatggatagcgatggagatggagatgaagagatgattttgccacca
atgaatgaggttgaagacccagctgtcttagctgctttgcccccattaatgcaacttgat
cttctgatgagagaaagatcatttgcagaaaagggaaaaagtaatcaagacaagcagttg
gagaaccagaatgacaagcacaaaaataatgcaaagggcaagcaaattttgtcggatcat
actgaatttgaagggagcaatatgggaagagatcatgtggcagcagagagttacaatcag
gagaagttagatgatatgttggcagcatctatggtggctgaggaggaaggcagtgatgaa
gatgaagagatgatactgccacatgggaaggttgatcctgctgttttagcagctctgcca
ccatcaatgcaacttgatcttctggtccagatgagagagaaattgattgctgaaaacaga
caaaggtatcaaaaagtcaagaaggtgcccgaaaaattctctgagcttcaaattcaggct
tatcttaaaactgttgctttccgccgtgagatagatcaagtgcagaaagctgctgctggg
aatgatgttggtggtgttcaggcttcaaggatagcttctgatgcaaaccgagaatttatt
ttctcatcatccttttctggggataaagagttgcttacaactgatggagtgaagagaaga
aaaggacacgagcaacaaaaggaaccattaaagcaaccatcttcagattttgtggctggt
gttgcatctatctgtaagtccaatactgtgacaggattttcccaggatgaatctagcagt
gcttttgatgatgatgttgagacatatcttgatgaaagaggtcgtatgcgagtcagtaga
gtcagagccatggggatgcgcatgacccgtgatttgcaaaggaacttggatttaatgaaa
gaaattgaaaaggataaaacgctttctatcaagactccaagtgctcggtctgtgcataac
agaaataagattggtacccccagaagttttcccaatgaaaatcataatggagaaagttca
catggtatcgatggcaactccactaacttgaacaagatgaacgagcagtccttgttgagt
aatgagacttctgtgcagatatcttttgaagttggtgacgagagcaagcattttagcagt
gatgacgaagtgtttgcttctttagtagctgaaaagcctgtaaaaatctcttctgctggc
aatagtacatcaagaagatattctgatgattctgcttctgatagtgactgggaggaagga
attgttaaaggaaaagctaatagttctcctaatgatgttgaattaagaactaagctgtct
cctaaggttagcaatgttagcgatgatagtgaagtggaatggatggaaggagattctgat
attcatgataactcctcctatctagctgaatcaaaaagaaaactagtttccaaaggtact
ttggaagaagaagctgctttgcaggatgctattaggagaagtcttaatgatttagtggtt
ggaaaattcatccagtcgcaatctaacccggaaaatattaaaatctctggagaaaatgtt
agcaatgacagtgaagtggagtgggtagaagtagatcctgatgttcatgataagtcctca
tatccagctaaatcaagaaatcaagtttctggaggttctatagaagatgaggctggtttg
caggatgccataatgaaaagtcttaatgatcttgggagtgaaaaatccatccactcagaa
tctgaccctaaaaatgttaaaagctctagaggacatgcttatgaaggtgtgggctttctc
gatcaagaagataatggttcagctatgctcaggaaggatgctacccaacaaagcaaatca
atctctgaaattttgggttttgaaaacctaggtgatgcaggtgaagttaatatctcacaa
gcctttccatctgtgggtagccaattaaagtcatctaaagctcataatcctgatgatgtg
gtgatgctaataaatgaatcacgtgaaagttatgtgcattctaatcctgcctggataagc
caagatgtggataaaagggagaatgggtgccaaggcatgccatctattgaatcaattggc
cgtttggaagcaaaggagaaccacttgaatttggaacctgcttctgatatagagaatggt
gggttatctgcctcccatgagaagtattcaagagacggctctcataccgctatagcagca
tctacttatctacctcttactgagctaattgatgatagaaatgataagaaagcagagcca
tccacgttcattggtggagagaaaattagttctgaggctgagccaccatgcctttcagtt
gagaactctttcccagaagattcattgaatggcagtgattttgcagagaaacttgatgga
gaaaaaaaagcagaagaccatgttagtgaaagggaatgctatatcagcaaatctgcatcc
atggataatgagaatgaacaggtcaattttacagaggctagtttggagaaggaaatgcta
atactagatcaagaatatagtaatctaggagatgaacagagaaagcttgagcgtaatgcg
gaatcagtcaccagtgagatgtttgcagaatgtcaggagctgctgcagatgtttggctta
ccatatattatagcaccaatggaagcagaagctcaatgtgcatatatggaacttgcaaat
tatgtcgacggtgctgtgactgatgattctgatgtcttcttgtttggagctcgaaatgtg
tataagaatatatttgatgatcgtaaatatgtggagacatacttcatgaaggatatcgag
aaagagcttggtctatcaagagagaaattaattcgcatggctctgcttcttggaagtgat
tataccgagggagttagtggcattggcattgtcaatgctattgaggttgtgactgcattc
cctgaggaggatggccttcaaaaattcagggattggattgaatcaccggatccagctatc
ctaggaaagtttgatgttcaaactggtctgggtgcgaggaaaaaagagtcaaaggttggt
ggtagtgaagcaaaatgcacaggtaatggcatggaagggacgaatccatctggcctaaac
attcctcaagctcatgaagaaaagcaatctgcagatcattctcaagtgataaagcaggtt
ttcatggataagcatagaaatgttagcaagaactggcacattccttcttcttttccgagt
gaagcagtcatttctgcgtattcttgtccgcaagtggacaaatcaacagagcctttcaca
tggggaaaaccagatcttcatgctcttcacagattatgctgggaaaagtttgggtggcac
attcagaagtcagatgagttgctacttcctgttctgaaggagtataataaacatgagact
caactacgactggaagcattttacagtttcaatgaaagatttgcaaaaattcgtagcaag
agaatcaagaaggctgttaaagggatcactggaaaccaatactctgacatgatggattat
cctgtggaagaggtttctaaaagtagaactggaaatatatctgggaaatctggtgacaat
gaacctcagacacattcaaaaagaactgcaagaactgctcctggcaataagagtagtttt
ctggaaaaatcaaaaccaaagtggtccaggaaaaggactgctgagcagcctgtttttcct
gaagttgagaatacagaggcaactgttaggcaatgtagcgatagaggattcctaagaaac
ggaaaaggtagagggagaggtcggggaaggggaaggggaaggggaaaggcaaatctttgt
tttgaacaatcagattcaagctcttgtgatgttgatagtggtcatgatgagcatgaagtg
catgttgatgagtcaaggggcccacatgaattacggaagtcaacacggttgcggaagcct
gtaaattacacagtcgatgacttagaaattgatgatgtggagaagtccttggaccagggt
gataaagaggggtttgacaaagaggcactgcatcaaggtttctcttctgctaaagaagca
cgtggagatggtggcattggcatcaaagacaatgaacaacttgaagtgggagattcttca
cttcagagcttctccagggattatcttgaagggggagatggattttgctttgatggagag
gaagttggtgtccctggcgtggaccaaaatagctatttttcgaaggttgaactttctgat
gatcaccttgaaaggggaggtggtttttgcctggacgaaagtgacgcaggcatggaccaa
ggcactaaccaaaacccacctagaacgggtgatcttttggaagaagttgagcatggcact
gagctcttgaatgaagtcagagatggagggaggacgagtgcttgtgaaactgagttgaat
gcggacagcgtggttgcagcagcacatgctggtggtcgtttaaggagcagcgtctctggc
ccagaaataactaagaatgagacgggggcaactggtggtgcaggaagtctaagtgcaatg
ccgtacctccttaaaagaaaacggaggaaaatgtga
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integrated database retrieval system
