Populus nigra (Lombardy poplar): 133670926
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Entry
133670926 CDS
T10372
Name
(RefSeq) ATPase family AAA domain-containing protein FIGL1-like
KO
K22766
fidgetin-like protein 1 [EC:5.6.2.-]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pnz03036
]
133670926
03400 DNA repair and recombination proteins [BR:
pnz03400
]
133670926
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
133670926
DNA repair and recombination proteins [BR:
pnz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
133670926
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
Mg_chelatase
bpMoxR
AAA_7
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
133670926
NCBI-ProteinID:
XP_061947543
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All DBs
Position
1:16486434..16489545
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AA seq
537 aa
AA seq
DB search
MDAYQNFCKQLLSIISCLHEQNAHLQKQQNTGRIPLLPSIPLFPGVPPHHHQLQQPSGSS
FPRQPQVPGSSGSRQPQVPGSSRSQQHCQKQSITHLPRPGSSFSSKEVANALALPETNGW
LFPNHKEPQGTQLNNRWQETPMHPSVAQFYKYLARPNFPPNPYILSPVNGSALNAQLRLK
APAESSASASPLGQNNPLSLQIPHFTEMGSSSTDGTRKKSLEMLRGPDDQLPEKLRHLEP
HLLERIIYEIMDTDLNVCWDDIAGLEHAKKSVTQMVVWPLMRPDIFKGCRDLGSGLLLFG
PPGTCKTMMAKTIAGEMKAAFFHLSARTLATKWVADSEKVVRTLFGIARCMQPAVIFCDE
IDLILNKSTTYAHQYSRRLKMQFLTEMESMDNKTARILLIGATSRPHDLDEVALKHLTRR
LHMPLPSPEARSYIISNLLKKDGLFSLSEKDLNTICCLTEGYSGSDMAILVKTAAMGPLR
DAMKEGFKDIENLEAEKLRAVTLEDFWTSMQAVRPSVSPNETGAHAHWNLQFGSMSL
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttatcaaaatttttgcaagcagcttctttcaataatcagctgcttgcacgaa
cagaatgcacatctacagaagcagcagaatacaggacggattcctcttcttccgagcatt
cctctatttccgggtgttcctcctcatcatcatcagctgcagcagccttcaggaagtagt
ttccctcgacaaccacaagtacctggaagttctggatctcgacaaccacaagtacctgga
agttctagatctcaacaacattgccagaaacaaagcattacacacctgccgcgaccagga
agcagtttctcgtccaaagaggtcgcgaacgcgctcgcattgccagaaacaaatggatgg
ctgtttcctaaccacaaagagccgcagggtactcaattgaacaataggtggcaagaaact
cccatgcatccatcggtagcccagttctacaagtatcttgcacgaccgaactttcctccg
aatccatacatattgtcgccagtaaatggatcggccctaaatgctcaattgcgactcaaa
gcaccggccgaatcttcagcttcggcctctcctctaggtcaaaacaatcccctaagtttg
cagatacctcattttacagaaatgggcagtagctcaacagatgggacgagaaagaaaagt
ttggagatgttgagaggtcctgatgaccagctacctgaaaaattacgacatttggaacct
catctgcttgaacgaattatttatgagatcatggatacggatcttaatgtttgctgggat
gatattgctggtcttgagcatgccaaaaaaagtgtcactcagatggtggtatggccttta
atgcgtcctgacatatttaagggttgtcgtgatcttgggagtggccttcttctatttggt
ccaccgggaacatgtaaaactatgatggcgaaaactatagctggagagatgaaagcagcc
ttttttcatttatctgccagaacattagctaccaaatgggttgccgattctgaaaaggtt
gtgaggacactttttggaatagcccgttgtatgcagccagcagtcattttctgtgatgaa
attgatttaatactaaataagagtacaacgtatgcacaccaatacagcaggcgtctcaag
atgcagttcctaactgagatggaaagcatggacaacaagactgctcggattttgcttata
ggtgcaacaagtagacctcatgatctcgatgaggttgccctaaaacacctaaccagaaga
ctgcatatgcccttgccttcaccagaagcaagatcatatatcattagcaatctattgaag
aaggatggattattttccttatctgaaaaagacttgaacactatttgctgcttaactgaa
gggtattcaggttctgatatggcaatcttagtgaaaaccgctgccatgggtcccctaaga
gatgctatgaaagagggttttaaggatatagaaaacttggaagcagagaagctgagagca
gtgacccttgaggacttctggacttcaatgcaagcagtaaggccttcagtttcaccaaat
gaaactggtgcacatgctcattggaacctgcagtttggcagcatgtcactgtag
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