Populus nigra (Lombardy poplar): 133671001
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Entry
133671001 CDS
T10372
Name
(RefSeq) bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like isoform X1
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00740
Riboflavin metabolism
pnz00790
Folate biosynthesis
pnz01100
Metabolic pathways
pnz01110
Biosynthesis of secondary metabolites
pnz01240
Biosynthesis of cofactors
Module
pnz_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
133671001
00790 Folate biosynthesis
133671001
Enzymes [BR:
pnz01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
133671001
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
133671001
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Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-GeneID:
133671001
NCBI-ProteinID:
XP_061947600
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Position
13:complement(3610887..3615411)
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AA seq
527 aa
AA seq
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MASFNVSSCPSTTTRAARSGSLACRNFRLFNGLHCVNSFSANGNALNLALIRLDGSKSSF
GIKGASKTRATLISGDELLSYSNDNGVVAKSALLDNGSVGVDLQPEAVAFGALSADNAFN
TNDFANGNDDRQLDRPSEGFSSIPDAIEDIRRGKIVVVVDDEDRENEGDLIMAAELATPE
AMAFIVKHGTGIVCVSMKGEDLDRLQLPLMVRQNENDEKLRTAFTVTVDAKHDTTTGVSA
NDRATTVLALASKDSKPDDFNRPGHIFPLRYREGGVLKRAGHTEASVDLAVLAGLDPVAV
LCEVVDDDGSMARLPKLLQFAERENLKIISIADLIRYRRKTDKLVEYASAARIPTVWGPF
TAHCYKSILDGIEHVAMVKGDIGDGEDILVRVHSECLTGDIFGSARCECGNQLALAMQQI
EAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQML
RDLGVRTMKLMTNNPAKYIGLKGYGLAVAGRVPLLTPITKDSKRQQW
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttcaatgtttcttcttgcccttcaacaaccacaagagcagctcgctctggt
tccctggcatgtaggaacttcagattgtttaatggattacattgtgtgaattcattttct
gcaaatgggaatgcattgaatttggcattgatccggctggatggtagtaaatcatctttt
ggtattaagggtgctagcaaaactcgagccacgctgatatctggtgatgagctactgtcc
tattccaatgacaatggtgttgttgcaaagagtgctcttctagataatggttctgttggg
gttgacttacagcctgaggcagtagcatttggagccctatcagcggataatgctttcaac
actaatgattttgccaatggtaatgatgaccgtcaattggatcgcccctcagaagggttc
tcttccatccctgacgccattgaagatattcgccgaggaaagattgtagtggttgtagat
gatgaagacagagaaaatgaaggggatctcattatggcagcagagttggcaacacctgaa
gctatggcgtttattgtaaagcatggcactggaatagtttgtgtgagcatgaaaggtgaa
gatctggacaggttacagcttcctttgatggttaggcaaaatgaaaatgatgaaaaactt
cgtacagctttcactgtgactgtggatgctaaacatgatacaacaactggggtttcggct
aatgatagggcaacaacagtgttagctcttgcatccaaagattcaaaacctgacgatttc
aaccgcccaggccacatttttccattgaggtatagggagggtggtgttctgaaaagagct
ggacacacagaagcttctgttgatcttgccgttctagctggattggatcctgttgcagtt
ctgtgtgaggttgtagacgatgatggctccatggctagattaccgaagcttcttcaattt
gcagagagggagaacttgaaaattatatctatagctgatttaatcaggtatagaaggaag
acagataagttggtagaatatgcttctgctgctcggatacctacagtgtggggaccgttc
acagctcattgttacaagtcaatcttggatggcattgagcatgttgcaatggttaagggt
gacattggagatggggaggatattcttgtgagggtacattcagaatgcctcacaggagat
atatttggatctgctagatgtgaatgtgggaatcagctggcacttgcaatgcagcagatt
gaagctgctggcagaggtgttttggtctatctccgcgggcatgaagggcgtggcattggt
ttgggtcataaactccgtgcatacaacctacaagatgatggacgtgataccgtggaggca
aatgaggagttggggctgcctgttgattcacgagaatatggcattggcgcccagatgtta
cgagatctgggtgtccgaacaatgaagttgatgacaaacaaccctgcaaagtacatcggg
ctcaagggttatggattggcagttgcaggaagagttccgctattaactcccatcacaaag
gacagcaagagacagcaatggtag
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