Populus nigra (Lombardy poplar): 133671104
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Entry
133671104 CDS
T10372
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133671104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133671104
Enzymes [BR:
pnz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133671104
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
133671104
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
TPR_TTI1_C
Raftlin
BTV_NS2
Motif
Other DBs
NCBI-GeneID:
133671104
NCBI-ProteinID:
XP_061947731
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Position
13:13244776..13247527
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AA seq
405 aa
AA seq
DB search
MVKFPEENEDGPSNPSRKRQRVSSTSGGFSAATPNQETQQHQENENQEATQQHQENENRE
TTHQHQSNENEETQQHESNEENEGTQQHQANENEETQEHQENENQESSEEEDEYLSDGGA
EAEQEDDVLDKLSSFLGDGAMSMTLMDLDILDCAICLYPLTIPVFQCENGHTACSSCCSK
LAHKCPACSFPIGNNRCRAIEKVLESVRIPCENMRYGCGETFIYSGKYNHDKSCIYAPCS
CPIQGCNFISSSKKLDPHLRCRHVGDVIRFYYGGAFPLPLTVGQNSVVLQETDDGAIFIL
HHHEETFGNIVTISCLGPPTSAGEHFYELSTNEYFYDLSKKSQGKSFKFQSYMQSIQSRV
DHPLSVGLVLPPGQFFGTSKMIYLDLIIWRKGDCPLNIQSSTNAN
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggttaagttccctgaagaaaatgaagatggacccagcaatccatctcgcaagagacaa
agggtttcttcaacttccggtggtttttctgctgctactccaaaccaagagacccaacag
caccaagagaatgaaaatcaagaagcaacccaacagcaccaagagaatgaaaatcgagag
acaacccatcagcatcaatcaaatgaaaatgaagagacccaacagcatgaatcaaatgaa
gaaaatgaagggacccaacaacatcaagcaaatgaaaatgaagaaacccaagagcatcaa
gaaaatgaaaatcaagaatcttctgaagaagaggacgagtatcttagtgatggtggggcg
gaagctgaacaagaggatgacgtactcgataaattaagcagttttcttggcgatggtgcc
atgtcaatgaccctcatggacctagatattcttgattgcgcaatctgcttatatcccttg
actatccctgtctttcagtgtgagaatgggcacacagcttgctcttcctgctgcagtaaa
cttgcacataaatgtcctgcctgctcgtttcctatcggcaataatcgctgtcgggctatc
gagaaggttcttgaatcagtaaggataccatgcgaaaatatgcggtatgggtgtggagag
acatttatttacagcgggaagtacaatcatgataagagttgcatctatgcaccatgctcc
tgcccaatacaaggttgcaacttcatcagctcttctaagaagttagacccgcatttgcgt
tgcaggcatgtaggtgatgtgatacgcttttactatggtggggcattccctcttccctta
actgttggtcaaaattctgtggttctccaagaaactgacgatggtgctatatttattctt
catcatcatgaagaaacctttgggaatattgtcacaattagttgcttagggccgcccaca
tctgcaggagaacacttctacgaactttcaacaaatgaatacttctatgatctttcaaaa
aaatctcagggaaagagtttcaaatttcagtcttatatgcagagtattcagagcagggtt
gatcaccctctctcggtggggctcgttctacctccaggtcagttttttggtacatctaag
atgatataccttgatctcatcatatggcgtaagggtgactgccctttaaacatccaaagc
agtacaaatgccaattaa
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