KEGG   Populus nigra (Lombardy poplar): 133671114
Entry
133671114         CDS       T10372                                 
Name
(RefSeq) THO complex subunit 4D-like isoform X1
  KO
K12881  THO complex subunit 4
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03013  Nucleocytoplasmic transport
pnz03015  mRNA surveillance pathway
pnz03040  Spliceosome
Brite
Messenger RNA biogenesis [BR:pnz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     133671114
    TREX complex
     133671114
Spliceosome [BR:pnz03041]
 Complex C
  Other components
   EJC/TREX
    133671114
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    133671114
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 133671114
NCBI-ProteinID: XP_061947744
LinkDB
Position
13:13738246..13742939
AA seq 278 aa
MAATVDMSLDDIIKKNRERGRGRGRASRGRGRGRGPVRSFNNGRMSGAVRRGPLSVNTWP
SRYSIAKPSRRVRSLPWQHDLLEDSIRAAGITGVEVGTKLYVSNLDYGVTNEDIRELFAE
VGDLKRYAVHYDKDGRSSGSAEVMYTRRSDAFAALKKYNNVLLDGKPMKIEIVGPNPVVP
ISARMNVTGANGKKKRTVVTTPGLGGGRGAGANNRGSGQSRRGGGDLRNGTRNGRGQAPG
RGQAPGRGRGRGKKQPVEKSVDELDKELESYHAEAMQT
NT seq 837 nt   +upstreamnt  +downstreamnt
atggctgcaactgtggatatgtctcttgatgacattataaagaaaaacagggagagaggt
agaggacgaggtagggccagccgtggacgtggccgtggacgtggacctgttaggtccttt
aataatggaaggatgtcaggggctgttcgtagaggccctctctcagtgaatacttggcca
tcaagatactccattgctaagccttctcgcagagtcaggagtttgccatggcagcatgat
ttgcttgaggatagcattagagctgcaggaataacaggagtagaagttggaaccaagttg
tatgtttcaaacttggattatggggtgaccaacgaagacataagggagctcttcgcagag
gttggagatctgaaacgatatgctgttcactatgacaaagatggtcgctctagtggctca
gctgaagttatgtatacaagaagaagcgatgcatttgctgctcttaagaagtataacaat
gttctgttagatggaaagcccatgaagattgagattgtgggtcccaatccagtggtgcct
atttcagctcgaatgaatgttactggagcaaatggaaagaagaagagaactgttgttacg
acacctggactaggtggtggaagaggtgctggtgcaaataatcgtggttctggtcagagt
cgtcgtggaggtggggatctaaggaatggtacgaggaatggccgtggtcaagctcctggc
cgtggtcaagctcctggccgaggacgtggccgagggaagaagcaacctgttgaaaagtca
gtagatgagctggacaaggaattggaaagttaccatgctgaagcaatgcaaacatag

DBGET integrated database retrieval system