Populus nigra (Lombardy poplar): 133671380
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Entry
133671380 CDS
T10372
Name
(RefSeq) sister chromatid cohesion protein SCC2 isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
pnz Populus nigra (Lombardy poplar)
Brite
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
133671380
BRITE hierarchy
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133671380
NCBI-ProteinID:
XP_061948118
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Position
13:complement(11048368..11062942)
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AA seq
1813 aa
AA seq
DB search
MSNSNSNPSGSGSVPRGIGLSNSIHSEVAPCLPLPSLPVFCGASDPELRLFDGASARNSN
FWFLNRNEILSQSSRIADLLRQTDVSYLTLRDENRETASDNVERLELYEEVLRCIPDAFE
YVTHGKQSKGQISGNAAFESKRIELSVPVSFQAQRDYDGFQNHQPKYTPNDIASSLRKPK
VKKKGSDDISAVIQPDPAELQGRATDATIGSFCDMLEDFCGRAEVPGDDREEAEWLSLPP
ADLRKLVNEITSLRAKKLLNLIPVEVLVRLLRVLDHQIHRAEGLSIDECEHSDSEVVSYV
FCALESIHAALAVMAHNNMPKQLYKEEIIERILEFSKHQIMDVMSAYDPSYRALHRPSEN
GAPEGYEDEEPDPDYGSANKKRRTVKSVRVKKSASNRVSGAVNTILQKLCTILGLLKDLL
LIERLSDSCILQLVRTSFTTFLVDNIQLLQMKAIGLICGIFYSYIQHRPYIIDEIVQLLW
KLPSSKRALRAYHLPDEEQRQIQMVTALLIQLVQSSANLPDALRQASSGNSILEVSLDAS
YPIKSHEAATETCCLFWTRVLQRFTTVKNQDASELKVMMENLVTDLLTTLNLPEYPSSSP
ILEVLCVLLLQNAGLKSKDVSARSMAIDFLGTIAARLKQDALICSGNKFWILQELSCGDD
VDLSFPKDACCVCLDGRVENRLFMCPGCHRLFHADCMGVREHEAPNRSWHCMICLCKNQL
LVLQSYSDSHYKDEEKKDNIRSKNNSDASDTVTKAEIVQQMLLNYLQDVVSADDAYLFVR
WFYLCLWYKDDPKSKQKFMYHLTRLKSNLIVRDSGTAFSLLTRDSVKKIALALGQNSSFC
RGFDKILHMLLASLRENSPVIRAKALRAVSIIVEADPDVLRDKRVQLAVEGRFCDSAISV
REAALELVGRHIASHPDVGLQYFEKVAERIKDTGVSVRKRAIKIIRDMCISNPNFTQFTT
ACIEIISRVSDDESSIQDLVCKTFYEFWFEESSGLRTQFFGDGSSVPLEVAKKTEQIVEM
LRRMPSHQLLVTVIKRNLALDFFPQSAKAVGINPVSLASVRKRCELMCKCLLERILQVEE
MNSDEVELCTLPYVLALHAFCVVDPTLCAPASDPSQFVVTLQPYLKSQVDDRAIAQLLES
IIFIIDSVLPLIRKLPQSVVEELEQDLKQMIVRHSFLTVVHACIKCLCSLSKVAAKGASV
VEYLIQVFFKRLDAQGIDNKQLAGRSLFCLGLLIRYGNSLLSISNNKNIDVASSLSLFKK
HLLMEDFGIKVRSLQALGFVLIARPEFMLEKDIGKILEATLSSGSHVRLKMQALQNMHEY
LLDAESQMDTDKTNSVAHHPVEGSNSVPVAAGAGDTNICGGIVQLYWDHILGRCLDFNEQ
VRQTALKIVEVVLRQGLVHPITCVPYLIALETDPQELNSKLAHHLLMNMNEKYPAFFESR
LGDGLQLSFIFMKSIVNISPEIPNQKIQSKTAGNLKGKSEGGSLSQARLGVSRIYKLIRG
NRVSRNKFMSSIVRKFDNPSRSDSVIPFLVYCTEMLALLPFTLPDEPLYLIYVINRVIQV
RAGALEANMKGLILHFSQRNARMVNENGFIQRELAEPVSHHMDMNGTIQPKPDGQPDYSP
LRSFDLNGTVQEQPADHAILNSSVSRYPKMERVSSGESVGISKDDVEKIQVDCLAATALE
LLLKLKRHLKIVYGLNDARCQAFSPTEPPKPGEAFSRQNIPFDMSQTGTSLPSTYQDLVQ
RYQEFKGALKEDTVDYSTYTANIKRKRPAPRKVKSGRVMGDDEDDEEDEDWASGGRRPGS
GRKGNSSRSRHRQ
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atgagcaattcaaattcaaatccaagcggttcgggttcggttcctagaggaatcggcctg
tccaacagcatacactctgaagtagcgccgtgtttgcctttgccttcgcttcctgttttc
tgtggcgcttcggatccggagctccggttgttcgacggagctagtgctagaaatagtaat
ttctggtttttgaatcgaaatgaaattctgtctcagtcttccagaatcgctgatctgctt
cgtcaaaccgacgtatcctacctgacacttagagatgagaatagggaaactgcgtctgac
aacgtggagcggttggaactttatgaagaggttcttcgctgcattcctgatgcatttgag
tatgttactcatggtaaacaaagtaaggggcaaatttctggaaatgcagcatttgaaagc
aagcgcattgagctaagtgtacctgtttcgtttcaagcacaaagagattatgatggattt
caaaatcaccaaccgaaatacacccctaatgacattgcctcatctctgaggaaaccaaaa
gtcaagaaaaaaggcagtgatgacatttcagcagtgattcagccagatcctgctgagctt
caaggtagagctactgatgcaacaattggaagcttctgtgatatgttggaagacttttgt
ggaagagctgaagttcctggtgatgatcgggaagaagcagagtggttatcgttgcctcct
gctgacctcagaaagcttgtgaatgaaataacatcgttacgtgcaaaaaagcttttaaat
ttgatccctgtagaagttcttgtaagactcttgagggttctggatcaccaaatacatcga
gctgaaggcttatccattgatgaatgtgaacattcagattcagaagtagtctcctatgtc
ttctgtgcgctggagtctattcatgcagctctagctgtaatggcgcataataacatgcca
aagcagctgtataaagaagagattattgaaagaattttggagttctctaagcatcaaata
atggatgtgatgtctgcttatgatccatcatatcgtgctttgcataggcctagtgaaaat
ggggcacctgaaggttatgaagacgaagagcctgaccctgactatggttcagctaacaag
aaacggcgaactgtaaagagtgtaagagtgaagaagtcagcatccaacagggtctctggt
gctgtgaatactatactacaaaaactgtgcacaatactcggtttactgaaggatttgttg
ttgatagagaggttatctgatagttgcattctacaactggtgaggacaagctttacgact
tttttggtggacaatatccaacttttgcagatgaaggctattgggttaatctgtgggata
ttctattcatacatacagcatcgtccatacatcatagacgaaatagttcagctactctgg
aagttaccatcctcaaagcgagcactcagagcctatcacctgcctgatgaagaacagagg
cagattcagatggtaactgctttactgattcaattggttcagagcagtgcaaaccttcct
gatgctttgaggcaagcatcgagtggtaattccatcttagaagtctctttggatgctagt
tatcctatcaagtcccacgaagcagccacagagacctgctgtcttttctggacccgagtt
ctccagcgcttcactactgtcaagaatcaagatgcttctgaactgaaagtgatgatggag
aatcttgttacagatctactaacaactctcaatttaccagaatacccttcttcgtctccc
attctggaggttctttgtgtcttactacttcagaatgctggactgaaatccaaggatgtc
tctgcacgttccatggccattgattttctgggcaccattgcagcaaggttaaagcaggat
gcacttatttgtagtgggaacaaattttggatattgcaggaactgagttgtggggatgat
gtggatctgagtttcccaaaagatgcatgctgtgtttgcttagatggaagggtggagaac
aggttgtttatgtgtccgggttgtcacagattgtttcatgctgattgcatgggagtgaga
gaacatgaagctcctaatcgaagctggcactgtatgatttgcctctgcaagaatcaactt
cttgtgttacaatcttacagtgattcacattacaaggatgaggaaaaaaaggataatatc
cggtcaaagaacaattcggatgcttcagatacagtaacaaaagctgaaattgttcaacaa
atgcttttaaattacctccaagatgttgtttctgctgatgatgcatacctctttgttcgc
tggttttatctgtgcttgtggtacaaggatgacccgaaatctaaacaaaagtttatgtac
catctcactagactgaaatcaaaccttattgtgcgtgattctgggactgcattttcattg
ttgacgagggattctgtaaagaagattgctttagcattgggacaaaatagttctttttgt
agagggttcgataagattcttcatatgcttttggcaagtttgagggagaattctcctgta
attagggccaaggcattacgagcagtcagtattattgtagaagctgatcctgatgtatta
cgtgacaagcgagtacaattggctgttgaaggaagattttgtgattcagcaatatctgtg
agagaagctgcattggaacttgttggtaggcatattgcttcacaccctgatgtcggtctg
cagtattttgagaaggttgctgaaaggataaaagatactggagtgagcgtgagaaaacga
gctatcaaaatcatcagagacatgtgcatttcaaatccaaacttcactcaatttacaact
gcatgtattgagatcatatcccgtgtcagtgatgacgaatccagtattcaggatcttgtc
tgcaaaacattttatgagttttggtttgaggaatcttctggattgcgaacacaatttttt
ggagatggcagttctgtgccactggaggtggctaagaagactgagcaaattgttgagatg
ttgaggaggatgccaagtcatcagcttcttgtcacagtcatcaagcgcaatctagccctt
gacttttttcctcaatcagctaaagctgttgggatcaaccccgtgtcacttgcatcagtg
cgcaagcgctgtgagttgatgtgcaagtgcttactggaaagaatactgcaggtagaggaa
atgaatagtgatgaagtggagctctgcacacttccttatgtgcttgcattgcatgcattt
tgtgttgttgatccaacgctttgtgcacctgcttctgatccctcccagttcgttgttact
ctacagccatatctcaagagtcaggttgatgaccgagctattgcacaattattggagagt
ataatctttataattgattctgttcttcccttaatccgaaagctgcctcaaagtgttgtt
gaagaactagagcaagatctgaagcaaatgattgttcggcattcgtttttgacagtggtc
catgcttgcatcaagtgtctttgttctttgagtaaagtagcagcaaagggtgctagtgta
gttgagtatcttattcaggtttttttcaaacgtttggatgctcaaggaatcgataacaag
cagctagcaggccgctctttgttctgtcttggattgcttattcgctatggaaactctttg
ctgagtatctccaacaacaaaaatattgatgttgcgagcagtctcagtttgtttaaaaag
catctccttatggaggatttcggtataaaagtcaggtctttgcaggcattaggatttgtt
cttattgctaggcctgagtttatgctggaaaaggacattgggaaaatattggaggcaact
ttatcttctggttctcatgttcgtcttaagatgcaagctttgcaaaatatgcatgaatat
cttctggatgctgaaagccaaatggacacagataagactaatagtgtagctcatcatcct
gtagaagggagcaacagtgtacctgttgctgctggtgcaggtgatactaacatctgtggt
ggtatagtccagctgtattgggatcatattttgggaaggtgcttggacttcaacgaacaa
gttcgccagactgcccttaagattgtggaagtagtactacgccagggtctggtccatcct
ataacctgtgttccatatctaatagcattggaaacggatcctcaagagttaaactcaaaa
ttagcccaccatttgctgatgaatatgaatgagaagtatcctgctttttttgaaagccga
ttgggtgatggccttcagctgtcatttatattcatgaaatctattgttaatatttctcct
gaaattccaaaccaaaaaatccaatctaagactgctggaaatctcaagggaaaatctgaa
ggtggctccctatctcaagcaaggcttggggtttctcggatatacaagcttattcgcgga
aaccgagtttcaaggaacaaatttatgtcctcaattgtgcgaaaatttgacaatccaagc
cggagtgattcagtgattccttttttagtgtactgcacggaaatgcttgctttgctgccg
tttactttacctgatgaacctctgtatttgatttatgttataaatcgagttattcaagta
agagcaggggcacttgaagcaaatatgaagggactaatcttgcatttttcccaaagaaat
gctcgcatggttaatgaaaatgggttcattcaaagggaacttgcggagcccgtttcccat
cacatggacatgaatggtacaattcaaccaaagccagatggtcagcctgattacagtcct
ttgagatcatttgatctgaacggaacagttcaagaacagcctgctgatcatgcaattcta
aactctagtgtctcaagatatccaaagatggagcgtgtgagctctggtgagtccgtaggc
atctccaaagatgatgtggagaaaattcaggttgactgcctcgcagcaactgctttggag
cttcttttgaagctcaagagacacctgaaaattgtgtatggccttaatgatgcccggtgc
caggctttttctcccactgaacccccaaagccaggagaggctttctcaaggcagaacatt
ccttttgacatgagtcaaacaggcaccagtttgccgtccacctatcaagatttggttcag
agatatcaggaattcaagggagccttaaaggaggatactgtcgattactcaacgtacaca
gcaaatatcaagaggaaacgacctgccccaagaaaggtgaaatctggacgtgtgatggga
gacgatgaagacgacgaagaagatgaagactgggcatccgggggtcggaggccgggcagt
ggcaggaaaggcaacagcagtagaagtaggcaccggcaatag
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integrated database retrieval system
