Populus nigra (Lombardy poplar): 133671407
Help
Entry
133671407 CDS
T10372
Name
(RefSeq) probable galacturonosyltransferase 9
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00520
Amino sugar and nucleotide sugar metabolism
pnz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
133671407
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pnz01003
]
133671407
Enzymes [BR:
pnz01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
133671407
Glycosyltransferases [BR:
pnz01003
]
Polysaccharide
Structural polysaccharide
133671407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
133671407
NCBI-ProteinID:
XP_061948158
LinkDB
All DBs
Position
13:12065803..12068073
Genome browser
AA seq
558 aa
AA seq
DB search
MAVAVRGIRGGGSGGINGGLRAFFSHRIFISATFTLLFLATLSALFSPHPHHHPSLPSSG
NAYVQRTFLAIKSDPLKTRLDLIYKQANDHMTLVNAYAAYARKLKLDISRQLRMFDELDK
NLTDLPLKPSYKSSLFEPGSDVDEDVLRQFEKEVKEKVKVARLMIAEAKESYDNQIKIQK
LKDTIFAVNELLIKAKKNGAFASLISAKSVPKSLHCLAMRLVGERIAHPEKYKEEGYKAE
FEDPSLYHYAIFSDNVIAVSVVIRSVVKNAEEPWKHVFHVVTDKMNVAAMKVWFRMRPVE
GGAHVEINAVEDFSFLNSSYVPVLKQLESANMQKFYFENQAENATKDGSNMKFRNPKYMS
MLNHLRFYLPEMYPKLHKILFLDDDVVVQKDLTGLWKVDLDGKVNGAVETCFGSFHRYAQ
YLNFSHPLIKERFNPKACAWAFGMNIFDLDAWRREKCTEHYHYWQSLNEDRTLWKLGTLP
PGLITFYSTTKSLDKSWHVLGLGYNPSISMDEISNAAVIHYNGNMKPWLDIAMNQYKNLW
TKYVDNDMEFVQMCNFGL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgtccgaggaatccgagggggaggcagcggcggcatcaatggtggatta
cgtgcctttttctctcaccggatcttcatctccgccacgttcactcttctattcctcgcc
actctctctgctctcttctcccctcaccctcaccaccacccctcactgcctagtagcgga
aatgcttacgtgcaacgcacttttttggcgatcaaatcagatccgttgaaaacacgatta
gatttgatatataagcaagcaaatgatcacatgacgttagttaatgcatacgccgcgtat
gcgagaaagctgaagcttgatatttctaggcagttaagaatgtttgatgaattagataag
aatttaacggatttaccgctgaaaccgagttataaatcctcgcttttcgagccgggtagt
gatgtagatgaggatgttttaaggcaatttgagaaggaagtaaaggagaaagtgaaagtt
gcgaggttaatgattgcggaggcgaaggagagttatgataatcagataaagattcagaag
ttgaaggatacaatttttgctgttaatgagttgttgatcaaggcgaagaagaatggagcg
tttgctagcttgatttctgccaagtcggtgccgaagagtttgcattgtttggcaatgagg
cttgtgggggagaggattgcccatccggagaagtacaaggaggaagggtataaggcggag
tttgaggatccgagtttgtatcattatgcgattttttcggataatgtgatcgcggtttcg
gttgtgattaggtctgtggtgaagaatgcggaggagccttggaaacatgtttttcatgtg
gttacggataagatgaatgttgcagctatgaaggtttggtttaggatgcggcctgtggaa
ggcggtgcgcatgtggagattaacgctgtggaggactttagttttctgaattcatcgtat
gtgccggttttgaagcagcttgagagcgctaatatgcagaagttttattttgagaatcag
gcagagaatgctaccaaagatgggagtaatatgaagtttaggaaccctaaatatatgtca
atgttgaatcatcttcggttttatttgcctgagatgtatcctaagctgcataagattctg
tttttggacgatgatgttgttgttcagaaggatttgactggtttgtggaaggttgatctg
gatggtaaggtgaacggagctgttgagacttgcttcgggtcatttcatcgttatgcacag
tatctgaacttttcacatcctttgattaaggagaggttcaaccccaaggcttgtgcttgg
gcttttgggatgaatatatttgatcttgatgcttggaggcgtgagaaatgcacagagcac
tatcattattggcagagcctgaatgaggatcgtactctttggaaattgggtactctccca
cctggcttgattaccttctactccacgacaaagtcactggacaaatcctggcatgtgctt
ggtctcggatataatccaagtattagcatggatgagatcagcaacgctgctgtcattcat
tacaatggaaacatgaaaccttggcttgacattgctatgaaccaatacaagaatctctgg
actaaatatgtagacaatgatatggaatttgttcagatgtgcaattttggtctttag
DBGET
integrated database retrieval system
