Populus nigra (Lombardy poplar): 133671445
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Entry
133671445 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133671445 isoform X1
KO
K17925
sorting nexin-13
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pnz04990
]
133671445
Domain-containing proteins not elsewhere classified [BR:
pnz04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
133671445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
133671445
NCBI-ProteinID:
XP_061948200
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Position
1:complement(33748425..33756907)
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AA seq
1144 aa
AA seq
DB search
MSTQRQVIVRDLMDEGKKRIVVLVICVVGLSYLMSLTSSSVWVNLPAAASLIILLRYFTM
DYEMRKKAAAYNNKPASAKSSTLPQNKSLELTRVVEKSDWRRKVNSPVVEDAIDHLTRHL
VSEWVADLWYSRLTPDKEGPEELVQLMNGVLGEFSSRMRNVNLIDLLTRDLINLICTHLE
LFRASQAKIEKQQSGLLTIDQRDKELRLVLAAENKLHPALFSAEAEHKVLQHLMDGLISF
TFKPADLQCSFFRYVVRELLACAVMRPVLNLASPRFINERIENVIISKANQRVAAAQEAS
HSKPNGSSRISSDHFSRFLDPTGTGVELTQLKTNQSRSGPEAPEKDKVNGSHNSKDPLLS
IDTPSSRTWSSLSKNSQINNEGEIERHLSGREWGEMFDMMSRRKTAALAPENFENMWTKG
RNYRKKEGENQSIKHASQNSSASKSNTSDYSKSTSNSKKDDVTKLDASLAHNDQSVGTEQ
SAVENPLHHVNQNMSNHSLFSSHRDGIQSLMHVDGTESGSTSSYTSEEEDVNFVTGLDSP
GTKVWDGKTNRNLAVSHIHHPLENPDGHRAKKTGRGHARYQRLSRPQSGRKRSRPSTQKV
PVWQEIERTSFLSGDGQDILSLKGHAKADDFTDDSEVESLDRVYSGSTACSPAPSVSITE
SHTLNDNSLKHSLMVDAFYKLRCEVLGANIVKSDSKTFAVYSLSVTDVNNNSWSIKRRFR
HFEELHRRLKEYPEYSLHLPPKHFLSTGLDMPVIKERCKLLDRYLKRLLQLPTISGSIEV
WDFLSVDSQTYVFSNSFSIIETLSGDLDDKPSEKSKRVSNFIGPATDSLSTRNKIKTEQL
SAECKESILQTKHALGVDGARMISKDMPQSPERKSVKEFGKSFKDPGCDSDTQKNASSAR
NLEKNIKGRESESLEEMSASLNDSANDPMLPTEWAPPNLTVPILDLIDVIFQLQDGGWIR
RQAFWVAKQILQLGMGDALDDWLIEKIQLLRRGSVVASGIKRVEQILWPDGIFITKHPKR
RPPPHQPSEVSSPKLISPHGQQPMEVSSPKFSNEQQQQDAARRAKLVYELMIDNAPAAIV
SLVGRKEYEQCAKDLYFFLQSSVCMKQLAFDLFELLLLAAFPELDYVFRQLHEEKHKFGE
FKPN
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcaaaggcaggtgatcgtacgggacttaatggatgaaggcaagaagaggatt
gttgttttggttatttgtgttgttggattatcttatctcatgtctttaacaagctcctca
gtttgggtcaacttgcctgctgctgcttccttgatcattctccttcgctacttcaccatg
gattatgaaatgcgtaagaaagctgctgcatataacaacaaacctgcctctgcaaaatca
agtacactgccacaaaacaaatctcttgaacttaccagggtagttgaaaagtctgactgg
agaaggaaagtgaattctcctgttgttgaggatgcaatagatcacttaacaagacatcta
gtctctgagtgggtggcagatctatggtactctcgcctgacccctgataaggaaggtcca
gaggaactggtgcagctaatgaatggtgttcttggggaattttcaagtcgcatgagaaat
gtaaatcttattgatctactgacaagggatcttattaatctcatctgcacccatttggag
ctttttcgtgcaagtcaagcaaagattgagaagcaacagtctggtttgcttaccattgat
cagcgagacaaggaactaagacttgttctggctgctgagaacaagttgcaccctgcttta
ttttctgctgaagctgagcacaaggttttgcagcatctgatggatggcctcatttctttc
actttcaagccagcagatctgcagtgctctttcttccgttatgttgtcagggaacttctc
gcttgtgcggtgatgcgaccagtgttaaacttggctagcccaaggttcataaacgaaagg
attgaaaatgttatcatttctaaggctaatcaaagagttgctgcagcacaagaagcatct
cattccaaaccaaatgggtcttcaaggatctcatccgatcatttttctaggtttttagac
cctactggaactggggttgaacttacacagttaaaaaccaatcaatccagaagtgggcca
gaggcacctgaaaaagataaggtgaatggaagccataactcaaaagatccattgctttcc
atcgataccccatcttcccgcacatggagctcactgtccaaaaactcccagattaataat
gaaggagaaattgaacgacatctttcaggacgtgaatggggtgagatgtttgatatgatg
tctcgcagaaagactgctgcccttgctccagaaaattttgaaaacatgtggacaaaaggg
agaaactatagaaagaaagaaggtgaaaatcagtcgatcaagcatgcctcacagaattct
tcagcaagtaagtccaatacatcagattattcaaagagtacgtctaattccaagaaggat
gatgtaaccaaactcgatgcttcgctggcccacaatgatcagtctgtgggtactgagcag
tctgctgtagaaaaccctctgcatcatgtcaatcagaacatgtcaaatcactcactattt
agttcacaccgagatggcatacaaagcctcatgcatgtggatgggactgaatcaggcagc
actagctcttatacttctgaagaggaagatgtgaactttgtaactggtcttgattctcca
ggaactaaagtctgggatggtaaaactaacagaaacctggctgtttcccacattcatcat
ccgcttgaaaatcctgatggccacagggcaaagaagactggtagagggcatgctcgctat
caaagattatctagaccccaatctggcaggaaaaggtcgaggccaagcactcagaaggta
cctgtttggcaagagattgagagaacaagcttcttgtctggggatgggcaggacatactt
agtttaaaaggacatgctaaagctgatgatttcactgatgattccgaggttgaaagtctg
gatagagtttacagtggatcaactgcttgttcgcctgcaccatctgtttctattactgaa
agccacactttaaatgataattccttaaaacattcattaatggtggacgcattttataag
ttgagatgtgaggtattgggtgcaaatattgttaagagtgactctaaaacgtttgctgtt
tattccttatctgttacggatgtaaataacaatagttggtcaatcaaaagaaggtttcga
catttcgaggagttacatagacggctcaaagaatatccggaatatagtcttcatttgccg
ccaaagcattttctctctacaggtttagatatgcctgtcataaaagagcggtgtaaattg
cttgacagatatctgaagaggctcttgcaacttccaacaatttcaggatctattgaagtc
tgggactttcttagcgttgattctcagacgtatgtgttctcaaattcattttctatcatc
gaaacattatcaggtgacctggatgataagccctctgaaaagagtaaaagggtctcaaat
tttatcgggcctgcaaccgattccttatccactaggaataagattaaaacggaacaattg
agtgcagagtgcaaggaatctatattgcagacaaagcatgctcttggggtagatggagca
cgaatgatttcaaaagacatgcctcaatctccagagagaaagtctgtcaaagaatttgga
aaatcattcaaggatccaggctgtgattcagatacgcaaaagaatgcatcatctgccaga
aatttagagaagaatataaaaggaagagagagcgagagtttagaagagatgtccgcatcc
cttaatgattctgctaatgaccccatgctccctacagagtgggcaccaccaaatttgact
gttcctatacttgatttgatagatgtcattttccagctacaagatggtggatggatcagg
aggcaggctttttgggtggccaaacagatactacaactaggaatgggtgatgctttagat
gattggttgatagagaaaatccagcttctgcgtaggggttcagttgttgcatcggggatc
aagcgggttgagcagatactttggcctgatggaatattcataaccaaacatccaaagaga
cgaccgccaccccatcaaccctcagaagtgtcctctcctaaattgatttcccctcatggc
cagcaacccatggaagtatcttcacctaaatttagtaatgagcagcaacaacaggatgca
gctcgacgtgctaaacttgtatatgagctgatgattgacaacgcaccagctgccattgta
agtcttgttggtcgaaaggagtatgaacaatgtgcaaaagatctctatttctttcttcag
tcatctgtttgtatgaaacaactggcgtttgacctctttgagctgctgcttttggctgca
tttccagaactggattatgttttcaggcagctgcatgaagaaaagcataaatttggtgaa
tttaaacccaattaa
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