Populus nigra (Lombardy poplar): 133671515
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Entry
133671515 CDS
T10372
Name
(RefSeq) ras-related protein Rab7-like
KO
K07897
Ras-related protein Rab-7A
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04144
Endocytosis
pnz04145
Phagosome
pnz04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133671515
04145 Phagosome
133671515
04148 Efferocytosis
133671515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133671515
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pnz04147
]
133671515
04031 GTP-binding proteins [BR:
pnz04031
]
133671515
Membrane trafficking [BR:
pnz04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
133671515
Exosome [BR:
pnz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133671515
Exosomal proteins of other body fluids (saliva and urine)
133671515
Exosomal proteins of colorectal cancer cells
133671515
Exosomal proteins of bladder cancer cells
133671515
GTP-binding proteins [BR:
pnz04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
133671515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
ATP_bind_1
RsgA_GTPase
AAA_16
nSTAND3
cobW
AAA_7
ATPase_2
AAA_24
Septin
AAA_22
PduV-EutP
NTPase_1
NACHT
MCM
AAA_5
TniB
Motif
Other DBs
NCBI-GeneID:
133671515
NCBI-ProteinID:
XP_061948270
LinkDB
All DBs
Position
1:33780561..33783175
Genome browser
AA seq
207 aa
AA seq
DB search
MATRRRMLLKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTKEVHFEDRLFTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVHDVNVMKSFENLNNWREEFLIQASPSDPENFPF
VVFGNKIDVDGGNSRVVSEKKAKAWCAAKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE
PEEEIYLPDTIDVAGGGRQQTSTGCEC
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggctactcgtagacgcatgctcttgaaggttataattctcggtgatagcggggtaggc
aagacatcactaatgaatcagtatgtgaatcgaaggttcagtaatcaatacaaggcgacg
ataggagctgacttcttaaccaaagaagtccattttgaggatagattgttcacattgcag
atatgggatactgcaggacaagagaggtttcaaagtcttggagtggctttctaccgtggt
gcagactgttgtgttcttgtgcatgatgtgaatgtcatgaagtcatttgagaatcttaat
aattggcgagaagagtttctgattcaggctagcccatctgaccctgaaaacttcccattt
gttgtgttcgggaacaagattgatgttgatggaggcaatagtcgagtggtttctgagaag
aaagcgaaggcatggtgcgctgctaagggaaacataccttactttgagacttccgcaaaa
gaaggtttcaatgtggacgctgcatttcagtgcatagccaaaaatgcgcttaagaatgaa
cctgaagaagaaatataccttcctgacaccattgatgttgcgggtggagggcgacaacaa
acgtccaccgggtgcgaatgttga
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