Populus nigra (Lombardy poplar): 133671547
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Entry
133671547 CDS
T10372
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2-like
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133671547
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pnz01002
]
133671547
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133671547
Enzymes [BR:
pnz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133671547
Peptidases and inhibitors [BR:
pnz01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133671547
Ubiquitin system [BR:
pnz04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133671547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
DUF4698
Ribosomal_L37ae
Motif
Other DBs
NCBI-GeneID:
133671547
NCBI-ProteinID:
XP_061948308
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All DBs
Position
13:4304642..4309443
Genome browser
AA seq
997 aa
AA seq
DB search
MGKRANKKKARPPQKEKRVAGHSPNIVPEQANPNVEIVDGVTAVKERKLCSHFDKGFDAS
KLSDKIRSLDSLRCEDCREGVGDRKGAKGRGKQAKKKGSGSVDSKSQSKAIWVCLECGHL
ACGGVGLPTTAQSHAVRHSKQSRHPLVFQWENPQLQWCFPCNTLIPVEKTEGNGEKKDSV
FEVVKTIKAQSFEQSSVDAVDVWIGRGSILSELNAEGTEATSLEGRSGHVVRGLVNLGNT
CFFNSVMQNLLSMNKLRDYLNEEASLGPLSIALKKLFTDLQAEASLRNVINPKSFFGSVC
SKAPQFRDYQQQDSHELLCCLLDGLSTEELIVRKRRNASKEDVIPPKHGPTFVDSAFGGR
ISSTVCCVECGHSSTMHEPFLDLSLPVPMKKPPIKKVQPVSRAKKTKLPPKRGGKVQPKV
NKNMDSVPTQNISNPSVHSEPSCQTQSSSDNTLAPDSTVPSTVVNESGIASQNSMAGIES
DSKQAAETTMEQTASSFEDFWMDYVGPETTSDEHGLTSENNDLAAGQQCGDKFDIPNDGL
METCQASSIDGEPNQKPESSSVNPWEEEVPFQVQSSEVLLLPYREEGFTDGEIMKGEAEA
SSSFVGCEQDEAEFDGIGDLFNEPEVSAAPVAGPSLPNEVAGPVFIAGIGSESDPDEVDD
TDSPVSIESCLSHFVKPELLSNDNAWECENCSKILQQQRLDAKKKQAKISSKTSLNGGET
QIQSDSASLYKDISYASEVRNFQNGDGIPNNLLNSTPKVFDSGNDSSNKKFIQAEIVQTE
MEPFISQSEERKCEMNVSHSSGYYESCNGETLSGPPVDSCSVDETSGTEYTMAKDEQTGS
NFSGNCESDVNEDEDKTSKKLNVKRDATKRVLIDKAPPILTIHLKRFSQDARGRLCKLSG
HVTFRDVLDLGPYMDPRSVDTERYVYRLLGVVEHLGTMRGGHYIAYVRGDERNKGKADKE
QGGSVWYYASDAHVREVSLEEVLRCDAYLLFYEKVSN
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaagggctaataagaaaaaggctcgcccaccgcagaaggagaagcgggtcgct
ggccattctcccaatattgtgcctgaacaagcaaatcccaatgttgaaattgttgacgga
gttacagcagtgaaagagagaaaattgtgttctcactttgacaagggttttgatgcgagc
aaattgtcggacaaaattaggtctttggattctcttaggtgtgaggattgtcgagaaggt
gttggtgataggaagggggctaagggaaggggtaaacaagctaagaagaaaggaagtggt
tcggttgattcaaaatcccagtcgaaagccatttgggtctgtttagaatgtgggcattta
gcctgtggaggggttggtttgccaacgactgctcagagccatgcagttcgtcattccaag
cagagtcgtcatcctttggtcttccaatgggaaaaccctcaacttcaatggtgcttccca
tgtaatacactaattccagttgagaaaacagagggaaatggtgagaaaaaagattcagta
tttgaggttgtaaagacgatcaaggcgcaatcatttgaacagtcatcagtggatgccgtg
gatgtttggattggaagaggcagtattcttagtgaacttaatgcagaaggcactgaggca
actagtttagagggaagaagtggtcatgtggtgagaggcttggttaatcttgggaacact
tgcttctttaattcagtcatgcagaatcttctatctatgaacaagttgcgtgactactta
aatgaagaggcatctcttgggcctttatcaattgctttaaagaagctatttactgatcta
caagctgaggccagtttaagaaatgtaatcaatccgaaatctttttttgggtcggtctgt
tccaaggctccccaatttagggattatcagcagcaagatagtcatgaattgctgtgctgc
ttacttgatgggctttctactgaagagttgattgttagaaagcgaagaaatgcttccaag
gaagatgtcattcctccaaaacatggtcctacgtttgtggattctgcttttgggggtcga
atttctagcactgtttgttgtgtagaatgtgggcactcctcaaccatgcatgagccattt
ctagatctctcacttccagttccaatgaagaaacctccaattaaaaaagtccaacctgtc
tctcgagcaaagaaaacaaagctgccaccaaagagaggggggaaggttcaaccaaaggtt
aacaaaaatatggattcagtgccaactcaaaatatatcaaacccatcggtccatagtgag
ccttcatgccaaacacagtcttcttcagataacactctagcaccagattcaactgttcca
tcgactgtggtcaatgaaagtggcatagcttcacagaattcgatggctggtatcgaatct
gatagtaagcaagctgctgagacaacaatggagcaaacagcaagttcatttgaagacttc
tggatggattatgtcggaccagaaactacatcagatgagcatggtcttacttcagaaaat
aatgatcttgcagcaggtcagcaatgcggggacaaatttgacattcctaatgatggctta
atggagacttgccaggcatcttcaattgatggggagccaaatcaaaaaccagaatcttct
tctgttaatccttgggaagaggaggttccatttcaagttcaaagctctgaagttcttctg
cttccatacagagaagagggctttactgatggggagataatgaagggagaagctgaggct
tcctcatcgtttgtgggctgcgaacaagatgaagcagaatttgatggcattggtgactta
ttcaatgagcctgaggtttcggcagctcctgttgcagggccctctttacctaatgaagtt
gctggaccagtttttatcgcaggaattggcagtgagtctgatcctgatgaagttgacgat
actgattctccagtgtctatagagagttgtttgtctcattttgtaaagccagaacttctc
tccaatgataatgcttgggaatgtgagaactgttcaaaaatcctgcaacagcaaaggttg
gatgcaaagaagaagcaggctaaaatatcttcaaaaacttcattaaatggaggtgagact
caaatacaaagtgattcagcgagtttatacaaggacatctcatatgcctctgaggtcaga
aactttcagaatggagatggtatccctaataaccttctcaactccacacctaaagtcttt
gattcaggtaatgattcctcaaataaaaaattcatacaagctgaaattgttcagacagag
atggaaccgtttatttctcaaagtgaagaaaggaaatgtgagatgaatgtttcacatagc
tccggttactatgaatcatgcaatggagaaactttgagtggtccacctgttgattcttgt
agtgttgatgagacaagtggtactgaatataccatggctaaagatgagcagactggctcc
aacttctctggaaactgtgagtcagatgtgaatgaggatgaggataaaacttcaaaaaaa
ctgaatgtaaagagggatgcaactaagagggtccttattgataaagcaccgcctattcta
accattcatttgaagaggttcagtcaagatgctcgtggtcgtttatgtaaattgagcggc
catgttaccttccgagatgtacttgatcttggaccttatatggatcccaggtctgttgac
acagagagatatgtatatcgcctgctcggggtggtagagcatttagggacaatgagggga
ggccactatattgcttatgtcagaggagatgagaggaacaaaggcaaggctgacaaggaa
caggggggttctgtgtggtattatgccagtgacgcccatgtgcgtgaggtttctctggaa
gaagttctgcgttgcgatgcttatttattattttatgagaaagtatcaaattga
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integrated database retrieval system
