Populus nigra (Lombardy poplar): 133671563
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Entry
133671563 CDS
T10372
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03015
mRNA surveillance pathway
pnz04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133671563
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133671563
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pnz01009
]
133671563
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnz03019
]
133671563
03036 Chromosome and associated proteins [BR:
pnz03036
]
133671563
Protein phosphatases and associated proteins [BR:
pnz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
133671563
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
133671563
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
133671563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
DUF5982
TetR_C_16
Motif
Other DBs
NCBI-GeneID:
133671563
NCBI-ProteinID:
XP_061948324
LinkDB
All DBs
Position
13:complement(7552448..7557714)
Genome browser
AA seq
524 aa
AA seq
DB search
MIKQILNRLPKKSSKSADSRDGSGTSTSSSNASTSSRNSDLVSNRYGSLSAASLPDFNSG
PNLGSGYGNKLSQAVNSKLNGNQPVPYEALPNFRDVPNSEKPNLFIRKLNLCCIVFDFNN
PTKNLKEKDIKRQTLTELVDYVSSANGRFSETVMQEIVKMLSVNLFRTLTSPPRENKVLE
AFDLEEDEPLMDPAWPHLQVVYEFLLRFVASTETDAKLAKRYVDHSFVLRLLDLFDSEDP
REREYLKTVLHRIYGKFMVHRPFIRKAINNIFYRFIFETEKHNGIAELLEILGSIINGFA
LPLKEEHKLFLVRALIPLHKPKCLPMYHQQLSYCITQFVEKDCKLADTIIRGMLKYWPIT
NSSKEVMFLNELEEVLEATQPADFQRCMVPLFCHIRCCLCSLHFQVAERALFLWNNDHIE
NLIKQNRRVILPIIFPALERNARQHWNQAVQSLTLNVRKIFSDIDPELFEECLLKFQKEE
SRENEIKSKREATWKRLEEIAAMKATSNEPVLISPKITRRTPSG
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgattaaacagatactcaataggctcccaaagaagtcctctaagtcagccgatagtcgt
gatggaagtggaacatctacctcatcatcaaatgcttctacaagctcaagaaacagcgat
ctagtcagtaaccgatatggaagcttgagtgctgcatctctgccagattttaattcaggt
ccaaatttaggatcaggttatggcaataagctttcacaagctgtgaattcaaagctgaat
gggaaccaacccgttccttatgaggccttgcctaatttcagagatgttcccaattctgag
aagccgaacttgtttatcagaaagctaaacttatgttgcattgtgtttgacttcaataac
cctacaaagaaccttaaagaaaaagatatcaagcgacaaactttgacagagcttgtggat
tatgtttcttcagccaatgggaggttctcagaaactgtaatgcaagagattgttaagatg
ttgtctgtaaacttgtttagaacgctcacttctcctcctcgtgagaataaagttttagaa
gcttttgatttggaggaagacgaacctttgatggaccctgcatggcctcatttacaagtt
gtttatgaatttcttttgaggtttgtggcgtcgactgaaactgatgcaaagttggcgaag
aggtacgttgatcactcatttgttctcaggttgttagatctttttgattcagaggatccc
agagagagggagtatctgaaaacagttttgcatcgtatttatgggaaattcatggtgcat
cggccattcatcaggaaagcaattaataacatcttctatcgctttatttttgaaactgag
aagcataatgggattgcagagctattagagattctgggaagcataatcaatgggtttgct
ctgcctctgaaagaagagcacaagcttttccttgttcgagctctcattccacttcacaaa
ccaaaatgcttgccaatgtatcatcagcaattatcatactgcattactcaatttgtggag
aaagactgcaagcttgctgatactattatacgggggatgctgaagtattggccaatcaca
aatagttcgaaagaggttatgttcttaaatgagttggaggaggttttagaagcaacacaa
ccagcagatttccagcgctgtatggtgcccttgttctgccatattcgctgttgcttgtgt
agtttgcattttcaggtggcagagagggctctgttcttgtggaacaatgatcacattgag
aacctaatcaaacagaatcgcagagtcatactgccaatcatcttcccagcattggagaga
aatgcaagacagcactggaatcaagcagtacaaagcttgacactgaatgttcgcaagatc
ttttctgatatcgacccagaactctttgaggagtgtttactcaagtttcagaaagaggaa
tcacgagagaatgagattaagtcgaaacgtgaagctacatggaaacgcttggaggagatt
gctgcaatgaaagctacaagtaatgagccagtgctcatctcccccaaaatcacgaggcgg
acaccgtctgggtag
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