Populus nigra (Lombardy poplar): 133671616
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Entry
133671616 CDS
T10372
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8
KO
K21343
ubiquitin carboxyl-terminal hydrolase 15 [EC:
3.4.19.12
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pnz01002
]
133671616
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133671616
04121 Ubiquitin system [BR:
pnz04121
]
133671616
Enzymes [BR:
pnz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133671616
Peptidases and inhibitors [BR:
pnz01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133671616
Membrane trafficking [BR:
pnz04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
133671616
Ubiquitin system [BR:
pnz04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133671616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
USP7_C2
DUSP
Motif
Other DBs
NCBI-GeneID:
133671616
NCBI-ProteinID:
XP_061948410
LinkDB
All DBs
Position
1:27851891..27863904
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AA seq
884 aa
AA seq
DB search
MENGLSEDLSDSTQLPESDNDQRVYFVPYRWWKDAQDATTSDESDGNRGVLFMATPPSSY
AGPMKLINSIFNPELAFNLRREENSLQNGESGEVGISGRDFALVSGEMWLQALKWHSDTK
VAAKCGKTFSAAEDDMSDVYPLQLRLSVLRETNSLGVKVIKKDNVTELFRRACKIFSLDS
EMLRIWDFSGQTALFFINDKTKFPKDCQQQSDQELLLELQIYGLSDSIKCREGKKADMAV
QNYNGIHSSGTSTAMNGNAGNTSTSIFRSNSSAFFGRSGEAGSLGLTGLQNLGNTCFMNS
AIQCLAHTPKLVDYFLGDYGREVNHKNPLGMNGEIALAFGDLLRRLWAPGATPVAPRTFK
SKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKSKPYVEAKDEESRPDEEVADEYW
QNHVARNDSVIVDVCQGQYKSTLVCPDCRKVSVTFDPFMYLSLPLPSTNTRTMTLTVVSA
DGSIPPSSYTISVPKFGKCEDLIQALSIACSLGIDETLLVAEVYNNRIIRFLEEPADYLS
LIRDNDRLVAYRLKKDFDNSPLVVFMHQHMEEHYFHGKLTSSWKAFGIPLVGNVHNFVTG
SDIHNLYLQLVAPFRIPPDGTLDNDLDSTTIEEVEGMVDNTGSSPDGDAKPCSAKGVELP
SDSELQFYLTDEKGMVKDENIVMNEPVPKIGLHKRFNVLVCWPEKLTKQYDTSLLSSLPE
IFKSGFFAKRPQESVSLYNCLEAFLKEEPLGPEDMWYCPSCKQHRQASKKLDLWRLPEIL
VIHLKRFSYTHSAKNKLETYVDFPVDDLDLSTHLSHKNGQLSHRYMLYAISNHYGSMGGG
HYTAFIHYGGDQWYDFDDSHVSPISQEKIKTSAAYVLFYRRVLK
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggagaacggtctctctgaagatctctccgattcaactcagttacccgaatcagacaac
gaccagcgagtctactttgttccatacaggtggtggaaggatgcacaagatgcaacgacg
tcggatgaatcagatgggaatagaggggttctgtttatggcaactccaccttcatcgtat
gcaggtcctatgaagcttataaatagcatcttcaatccagaacttgcgtttaatttgagg
agagaagagaattctttgcagaatggtgaaagtggtgaagtgggtatctccgggcgggat
tttgcattggtttcgggagaaatgtggttgcaggcacttaaatggcacagtgacactaaa
gttgcagcaaagtgtggaaaaaccttttcagctgcagaagatgacatgtcagatgtctac
cctttacaactcaggctttctgtattgcgagagacaaattcattaggagtaaaagttatc
aaaaaggacaatgtaactgagcttttcagaagagcctgcaagattttcagtcttgattct
gagatgcttcgcatctgggacttttcggggcagacggctctttttttcataaatgacaaa
actaagttcccgaaggactgtcagcagcagtctgatcaggagcttctcctggagttgcaa
atttatggattatctgatagcattaagtgcagagaagggaagaaagctgatatggctgta
caaaattataacggaatacattcttctggaacttcaactgctatgaatggaaatgcaggc
aatacaagcaccagtattttccgcagcaattcttcagcgtttttcggcagatctggagaa
gctggttccttgggattgacaggattacagaatcttggaaatacttgcttcatgaatagt
gccattcagtgcttagcacacacaccaaagcttgtagactattttcttggagattatggt
agagaagtaaaccacaagaaccctttggggatgaatggcgagattgccttagctttcggg
gatttgttaaggagattgtgggctcctggagcaactcccgtggctccaagaacattcaag
tcaaagcttgctcgttttgctcctcaattcagtggctttaatcagcatgattctcaggaa
ctccttgcttttttgttggatgggctccatgaggatctgaatcgtgtgaaatccaaacct
tatgtagaagccaaagatgaggagagtcggccagatgaagaagtagctgatgaatattgg
cagaatcatgtggctcgcaatgactctgttattgtcgatgtttgccagggtcaatataaa
tcaactctagtttgtcctgattgcagaaaggtttctgttacatttgatccatttatgtac
ctatcactacctctaccgtcaacaaatacccggactatgactttgacagttgttagtgcc
gatggcagtattccaccatcttcatacaccatttctgtgccgaagtttggaaaatgtgaa
gatcttatccaggctctaagcattgcatgttctttagggattgatgagaccctattggtg
gcggaggtatacaacaatcgcattatacgatttctagaggagccagcagattatttgtcc
ttaatcagagataatgaccgcttggttgcttatcggttaaaaaaagattttgacaattct
cccttggttgtttttatgcatcagcacatggaggagcattacttccatgggaaacttact
tcaagttggaaggcatttggaatccctctagtagggaatgtccacaattttgtcactggg
tctgacattcataatctatatctgcaattggttgctccatttcggatacctcctgatggt
accttggataatgacttggacagcactacaattgaagaagtggaagggatggtggataac
accggttcctctcctgatggggatgcaaaaccctgtagtgcaaaaggggttgagttacca
tcagattctgaactacagttttatttaacagatgagaagggaatggtcaaggatgaaaat
atagtaatgaatgagcctgtaccaaagataggattacacaagcggtttaacgtgcttgtt
tgttggccagaaaaactgactaaacagtatgacacaagccttcttagctcattgcctgag
attttcaagtctggattttttgcaaagagacctcaggaatctgtttctctatacaactgc
ctagaagcatttttaaaggaggaacctcttggaccagaagacatgtggtactgtccaagt
tgcaagcagcatcgtcaagccagtaaaaaattagatctctggagactgccagagattctg
gttattcatttaaagagattctcgtatacgcattctgcaaagaacaagctagagacatat
gttgacttccctgttgatgatcttgatttgtcaacgcatctttcccacaagaatggtcag
ttatcccatcgttacatgctttatgctatcagtaatcactatggaagcatgggaggcggt
cactacacagcatttatccattatgggggtgatcagtggtatgactttgacgatagtcat
gtttccccaatcagccaggagaagataaagacttctgctgcatatgttcttttctacaga
agagttttgaagtag
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