Populus nigra (Lombardy poplar): 133671629
Help
Entry
133671629 CDS
T10372
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00900
Terpenoid backbone biosynthesis
pnz01100
Metabolic pathways
pnz01110
Biosynthesis of secondary metabolites
Module
pnz_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
133671629
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pnz01006
]
133671629
Enzymes [BR:
pnz01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
133671629
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
133671629
2.5.1.29 geranylgeranyl diphosphate synthase
133671629
Prenyltransferases [BR:
pnz01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
133671629
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
133671629
NCBI-ProteinID:
XP_061948422
LinkDB
All DBs
Position
13:13365080..13366496
Genome browser
AA seq
364 aa
AA seq
DB search
MAFSVTISCYDNLLLKKSINGLYAQPRASLDHIKVFPMKTQATYAANQSFFEQSFRAHEE
NNKPQKVPLPPFGFKEYMIQKGNQVNKALDEAVPLQHPRKIHEAMRYSLLAGGKRVRPIL
CIASCELVGGDEELAMPTACALEMIHTMSLIHDDLPCMDNDDLRRGMPTSHKVFGEDTAV
LAGDALLALAFEHVASNTKNVSSDRVVQALAELGSAVGSKGLVAGQVVDIESEGKEVSLS
TLEYIHVHKTAKLLEAAVVCGAIMGGADATSVERLRKYARSIGLLFQVVDDILDITKSSE
ELGKTAGKDLTSDKATYPKLIGIDEAKKFAAQLTDQANQELGFYDPVKAAPLYHLASYIA
SRQN
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggccttctctgtaacaatttcttgctacgacaatttacttctgaaaaaatccatcaat
ggcctatacgcccaacctagagcctcattagaccacatcaaggtttttcccatgaaaact
caagcaacctatgctgcaaaccaatctttcttcgagcaatcgtttagagcccatgaagaa
aacaacaagccacaaaaggtccctttaccgccattcggatttaaggagtacatgatccag
aagggaaatcaagtgaacaaagcactagatgaggcagtgcccttgcaacatcccagaaaa
atccatgaagccatgagatattctctccttgcaggtggaaagcgtgtacgtccaatttta
tgcattgcttcgtgtgaattagtgggaggagatgaggaattagcaatgccaacggcttgt
gcactggagatgattcacaccatgtcgctaatccatgatgatcttccttgtatggacaat
gatgatcttagacgaggtatgcccacaagccataaagtttttggtgaagatacagcagtt
cttgctggtgatgcactcctagcacttgcctttgagcacgtagctagtaataccaagaat
gtctcgtcggaccgcgtggtccaagcccttgccgagcttggatccgctgttggatcaaaa
ggtctggtggcaggtcaggttgtggacattgaaagtgaaggtaaagaagtgagtttgagc
acactggagtacattcatgtccataaaacagcaaagcttttagaggcagcagttgtttgt
ggggcaataatgggaggggcagatgctacaagcgttgaaagactaagaaaatatgctaga
tctatcggattgttgtttcaggtggtggatgatatattggatataaccaagtcctccgag
gagctaggaaagaccgccggcaaggatttgaccagtgacaaggctacataccctaagctg
atcggcatagatgaggccaagaaatttgctgcccagttgactgatcaagctaatcaagaa
cttggtttctatgatcctgttaaggctgccccattgtaccatttggctagttatattgct
agtcgacaaaattaa
DBGET
integrated database retrieval system
