Populus nigra (Lombardy poplar): 133671693
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Entry
133671693 CDS
T10372
Name
(RefSeq) coatomer subunit beta'-2-like isoform X1
KO
K17302
coatomer subunit beta'
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133671693
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pnz04147
]
133671693
Membrane trafficking [BR:
pnz04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
133671693
Exosome [BR:
pnz04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
133671693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_HPS5
NBCH_WD40
WDR90_beta-prop_4th
WD40_like
Beta-prop_IFT122_1st
PEP5_VPS11_N
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_Nup120_160
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
TPR_8
TPR_GEMI5
WD_LRWD1
HEAT_GCN1
TPR_2
TPR_CcmH_CycH
Clathrin
Motif
Other DBs
NCBI-GeneID:
133671693
NCBI-ProteinID:
XP_061948515
LinkDB
All DBs
Position
1:34224603..34235457
Genome browser
AA seq
916 aa
AA seq
DB search
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILVSLYSGTVCIWNYQSQTMAKSFEVTELPV
RSAKFIARKQWVVAGADDMYIRVYNYNTMDKIKVLEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAVGYMKGSRRIVIGYDEGTIMVKIG
REEPVASMDNSGKIIWAKHNEIQTVNIKSVGVDFEVTDGERLPLAVKELGTCDLYPQTLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSADGEYAVRESTSKIKIFSKNFQ
EKKSIRPTFSAERIHGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLFWADSGDLVAI
ASDTSFYILKYNREIVSSYLDNGKPVDEQGIEDAFELLHETNERVRTGLWVGDCFIYNNS
SWRLNYCVGGEVTTMYHLDRPMYLLGYLAGQSRVYLIDKEFNVMGYTLLLSLIEYKTLVM
RGDLERASEVLPSIPKEHHNSVARFLESRGMIEDALEVATDPDYRFELAIQLGRLEAAKE
IASEVQSESKWKQLGELAMSSGKLEMAEECMRHATDLSGLLLLYSSLGDAEGISKLGSLA
KEQGKINVAFLCLLMLGKVEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLNK
VNPKAAESLADPEEYPNLFDDWQVALSVESRAAGTRGVHPPAEDYQYHADKPHITLVEAF
RNMQVEEEEPLENGDFDHESDEQNGDEHNAEEQNGEEGSQEEAVVVDADSTDGAVLVNGN
EPEEEWGTNNEETPSA
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcagactcgaaatcaagaggaaacttgctcaaagatcagagagagtaaagtca
gtcgatctacatccaactgaaccatggattttagtgagtttgtattcagggactgtgtgt
atctggaactaccagtcacagaccatggcaaagtcttttgaggtcactgaattaccagtt
aggtcagccaagtttatagcacgaaagcagtgggttgttgctggggccgatgacatgtat
attcgtgtgtacaactacaacacaatggataagataaaagttttagaggcgcatacagat
tacattagatgcgtggctgtccatcctacccttccatatgtgttgtcatcatctgatgac
atgcttataaaactttgggattgggagaagggttgggcctgtactcagatatttgagggg
cattctcattatgtgatgcaggttacttttaatccaaaagacaccaacactttcgcaagc
gcatcccttgatcgcaccataaagatatggaatcttggctctcccgacccaaatttcact
ctggatgcccatcagaaaggagtaaattgtgtcgattactttactggtggagataaacct
tatctaataactggttctgatgatcacactgcgaaggtatgggactatcaaactaaaagt
tgcgtccagactttggacggccatacacacaatgtctctgctgtatgtttccatcccgaa
cttccaataataattacaggttctgaggatgggaccgttcgtatatggcattcaacaact
tacaggcttgagaacaccttgaattatggcctagaaagagtttgggctgttggatacatg
aaaggttcacgccgtattgtgattgggtatgatgaaggaaccattatggtcaagatcggc
cgagaagaacctgtagctagcatggacaatagtggaaagattatatgggccaagcacaat
gaaattcaaactgtgaacattaagagtgtgggggtagattttgaggtcactgatggtgaa
agattgcctttggctgttaaggagttgggaacatgtgatctttacccccaaaccttaaag
cacaatcccaatgggaggtttgttgttgtctgcggagatggtgagtacatcatatataca
gctttagcatggagaaacagatcatttggttctgcacttgaattcgtttggtctgctgat
ggtgaatatgctgttagagaaagtacatcaaagattaagattttcagtaaaaatttccag
gaaaagaagagcatccggccaaccttttcagctgagcgtattcacggaggaaccctgttg
gctatgtgctcaaatgatttcatttgtttctatgactgggctgaatgcaggttgattagg
agaattgatgttactgtgaaaaatctcttttgggctgacagcggagatttagtggctatt
gcaagtgatacgtcattctacatcctcaaatacaatcgtgagatagtttcatcttattta
gataatggaaaacctgtggatgaacaaggtattgaggatgcatttgagcttcttcatgaa
accaatgaacgtgtcagaactggcttatgggttggggattgttttatatataacaactcc
tcctggaggcttaattattgtgttggaggcgaggtaaccactatgtatcatctggaccgt
cccatgtacttactggggtaccttgctggtcaaagtcgggtgtatttgatagacaaagaa
ttcaatgtcatggggtacactttactccttagcttaattgagtacaagactctggtgatg
cggggagatctggagagggccagtgaagttttaccttcaattcctaaagaacaccataat
agtgtggctcgtttcttggaatcacgaggcatgatagaggatgctctggaagtagctact
gaccctgattacagatttgagctagctattcagcttggtagattagaggctgcgaaggaa
attgccagtgaagtgcagagtgagtcaaagtggaaacagttgggagagttggccatgtcc
agtggaaagttggaaatggctgaggaatgcatgaggcatgcaacagacttgagtggtttg
ctgctactgtattcttccttgggagatgctgaagggatatcaaagcttggatccttggca
aaagaacaggggaagataaatgttgcattcctttgtttgttaatgttgggcaaagttgaa
gactgcctccagttgttggtggaaagcaatcggatacctgaggctgctttgatggcacga
tcttatcttcccagcaaggtttcagagattgttgcaatttggaggaaagacctgaacaag
gtcaatccaaaagctgcagaatctctggctgatcctgaagaatatccaaatttgtttgat
gattggcaagttgctttatctgtcgaatctagagctgcagggacaaggggtgtgcatcct
cccgcagaggactaccaataccatgctgataaacctcacatcaccctcgtggaggctttc
agaaacatgcaagtagaagaggaggaacctcttgaaaatggagactttgatcatgagtct
gatgaacagaatggagacgaacataatgccgaggaacagaatggtgaagaagggagccaa
gaggaagcagttgtggtggatgcagattccacagatggtgctgtacttgttaatggaaac
gaacctgaggaagagtggggtacgaataatgaagaaaccccgtcagcctaa
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