Populus nigra (Lombardy poplar): 133671738
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Entry
133671738 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133671738
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnz03016
]
133671738
Enzymes [BR:
pnz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
133671738
Transfer RNA biogenesis [BR:
pnz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
133671738
Prokaryotic type
133671738
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
133671738
NCBI-ProteinID:
XP_061948565
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All DBs
Position
1:15068617..15077388
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AA seq
531 aa
AA seq
DB search
MAKSLSLLCFLPKPMAFSTTTKATFYPSLFPSKRPTLSNKPIFSLYQNLFSTTSTRYPLQ
YEMIINRPVQPQRPQSRPQPARVTRPDSDSDSDSTQNPDAELGLDSWVDRKLSEDEMDKS
KRKYYRKRRKRMYGSDSDDENKKNEEGFVELKPEVVEFHRLHKREEELYFYDAFAYPWEK
DKHYKMVYQLEKKYFPDQCLDKAFLDPKDSNNVNQSGKPKKTKSGVKRGEKERDHSGVGE
GEEDKRLVFFDEEEKGERGTDLNDKKDVTERKVEEFFKCLKKVPNKDNEVDTGDPYLSTR
NALPPRWDGPYGTVVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVG
KATKLVDRYQGMVKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDADIKKAAASFRGEI
WQVPPMFSAIKVGGERMYEKARKGESIELSPRRISIFQFDIERSLEDRQNLIFRVTCSKG
TYIRSLCADFGKALRSCAHLTALRRDSIGEYSAEDAWEFKELEEAITKNYF
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggctaaatcactttctctgctctgcttccttccgaaaccaatggccttttcaacaaca
acgaaagcaacattctatccttctctctttccctcaaaaagacccactctctcaaacaaa
cctatcttctcactatatcaaaatctcttctccaccacttctactagataccctcttcaa
tatgagatgatcattaaccgccccgttcagccccaacgcccccaatctcggccacaacct
gctcgagtcactagaccagactcagactcagactccgactcaactcaaaacccagatgca
gaacttggtcttgattcatgggttgatcgaaaactgtctgaagatgagatggataagtct
aaaagaaagtattatagaaagaggaggaaaagaatgtatgggtcagattctgatgatgaa
aataagaaaaatgaagagggttttgtagagttgaagcctgaagttgtagaatttcatagg
ttacataagagagaggaggagttatatttttatgatgcttttgcttatccatgggagaaa
gataagcattataagatggtttatcaattggagaaaaagtatttccctgaccaatgcctt
gataaggcatttcttgatcctaaagactcaaataatgtaaatcaaagtgggaaaccaaag
aagaccaagagtggggttaagagaggagagaaggagagagatcatagtggggttggagag
ggagaggaagataaaaggttggttttttttgacgaagaggagaagggtgagagagggact
gatttgaatgataagaaggatgttaccgagaggaaagtcgaggaattctttaagtgtttg
aaaaaagttcccaataaggataatgaagtggatactggagatccttatctttctacaagg
aatgctcttccaccaaggtgggatggtccttatgggactgtggttttggtgaataagcct
aaaggatggacttcatttacagtttgtggaaagctgcgtcgcctggtcaaagtgaaaaag
gtggggcatgctgggacgcttgatcctatggcaactggtttattgattgtgtgtgttggt
aaagccacaaagctggtagatagatatcaaggtatggttaagggttatagtggagtgttc
cgtttaggggaggctacttcaacttgggatgctgattcaccggttattcaacgtgaacct
tgggagcacattaaagatgctgacattaagaaagctgctgcatcatttcgtggggagata
tggcaagttccaccgatgttctctgcaatcaaagttggaggtgaaaggatgtatgagaaa
gcaaggaaaggagaaagcattgagctctcgcctagaagaatttcaatttttcaattcgac
atagagcgaagcttagaggacaggcaaaatttgatcttccgagtgacatgctctaaagga
acatacattcggtcactctgtgcagattttggaaaggctcttcgaagttgtgctcattta
actgctcttcgaagagattcaattggtgaatattcagcagaagatgcatgggaattcaaa
gaactggaagaggcaataactaaaaattatttctaa
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