KEGG   Populus nigra (Lombardy poplar): 133672001
Entry
133672001         CDS       T10372                                 
Name
(RefSeq) UBP1-associated protein 2A-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133672001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pnz03019]
    133672001
   03041 Spliceosome [BR:pnz03041]
    133672001
Messenger RNA biogenesis [BR:pnz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     133672001
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     133672001
Spliceosome [BR:pnz03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    133672001
SSDB
Motif
Pfam: RRM_1 RRM_7 DUF3292 DNA_pol_phi Piezo_TM1-24 PNISR RRN3 Nop14 Mat89Bb
Other DBs
NCBI-GeneID: 133672001
NCBI-ProteinID: XP_061948583
LinkDB
Position
1:complement(27018821..27022077)
AA seq 473 aa
MVKKRKPTSKPQQSSSSKQPKIEKPPQPPPPSSEAEEVAAVVEEEEEEEEEEEEEEDSSS
SETESGDSGSEEEEESESESESEEEESEDSKRETISKILQPFTKELLIKILKEAASTDPC
IATELFNSVDSDPVHRKIFVHGLGWDAHNETLISVFKKYGEIEECKIVTDKATGRSKGYG
FLLFKTRIAARKALKEPQKKVGNRTVSCQLASLGKGQNQKQDNNSDVSLRKLYIGNVGPQ
ISVENLRDFFAQFGEIEDGPSGFDKSTRKFRGFAFIVYKSLEGIRKALEEPVKVFEGLKL
QCSLSTKNSSGGGGNANVAEASSAGSGNNAGVVQGNLGIQGLLNQGMVGQSVNPTGAVFL
GQNPALGVLNPVLGLGVGAGGMLNQTGLSPLFPGGVSQPLNRVGNVGPSIGLGAGFTTQH
GINTISNSMIGSYNSQAALQGLGAYQSSQLSQPSASAARSQAGIGSVPSYFGR
NT seq 1422 nt   +upstreamnt  +downstreamnt
atggtcaagaaacgaaagcccacttccaaaccccaacaatcatcctcttctaaacaaccc
aaaattgaaaagcccccgcagcctccaccaccttcctcagaagccgaagaagtagcagca
gtggtagaggaagaggaggaggaggaggaggaggaggaagaagaagaagacagttcctca
tcagaaacagagtcaggggattcaggatccgaagaggaggaggaatctgaatctgaatct
gaatccgaagaagaagaaagcgaagattctaaacgagaaaccataagcaaaatcttacaa
cccttcactaaagaactacttatcaaaatcctcaaagaagcagcctccactgacccatgt
atcgccacagaactcttcaactccgtcgattctgacccagtccaccgcaaaatcttcgtt
cacggactcggttgggatgcccacaacgaaacccttatctcagttttcaaaaaatacggt
gaaattgaggaatgcaagattgtaactgataaggctacaggtcgctcaaaagggtatggt
tttcttctctttaaaacgcgaattgctgcgcggaaagcgcttaaagagccacaaaaaaag
gtggggaatcgaacggtttcgtgtcaattggcgtctttaggaaaggggcagaatcagaaa
caggacaataactctgatgtcagtttgaggaaattgtacatagggaatgtgggtccgcag
attagtgtggagaatcttagagacttttttgctcagtttggagaaattgaagatgggcca
tcaggttttgataagagtactaggaagtttaggggttttgcctttattgtttataagagt
ttagaggggattaggaaggcattagaagagcctgttaaggtttttgaaggtttaaagttg
cagtgctcactatctactaagaatagcagtggtggtggtggtaatgctaatgttgcggag
gcgtcgagtgctggttctggtaacaatgcaggagttgtgcagggaaatttgggaattcag
ggtttattgaaccagggaatggtggggcagagtgtgaatccaacaggtgcagttttcttg
gggcagaatcctgctttgggggttttgaatccggtgctgggtctaggtgttggtgcaggt
gggatgctgaatcagacagggttgagtccattgtttcctggtggggtttcgcagcctttg
aacagagttgggaatgttggtccttctattggattgggtgcaggatttaccacacagcat
gggattaatactataagcaacagtatgattggtagttataattctcaggctgctttgcag
ggattgggtgcttatcagagttctcaattgagtcagccttctgcatcagcagcaaggtct
caggctggcattggatctgtgccgagttattttgggcgctag

DBGET integrated database retrieval system