Populus nigra (Lombardy poplar): 133672281
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Entry
133672281 CDS
T10372
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2-like isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnz03400
]
133672281
Enzymes [BR:
pnz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
133672281
DNA repair and recombination proteins [BR:
pnz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
133672281
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
133672281
NCBI-ProteinID:
XP_061948640
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Position
14:9251038..9254882
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AA seq
617 aa
AA seq
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MGNPIKIVSYNVNGLRQRVSQFGSLSNLLNTFDADIICFQETKLRRQELTSDLVIADGYE
SFFSCTRTKDKGRTGYSGVATFCRVKSAFSSTEVALPVAAEEGFTGFIDRCKRKEGLEEF
EKDELVKVDSEGRCVVTDHNHFVLFNLYGPRAAHDDTERIEFKMKFFKILQKRWENLLHE
GRRVFVVGDLNIAPTAMDRCDADPDFEKNEFRRWFRSMLMMSGGLFVDVFRGKHPDRREA
YTCWSSSTGAELFNFGSRIDHILCAGPCLHQEHDLQGHNFLSCHVKECDILTQYKRWKPG
DTTRWEGGRGIKLEGSDHAPVYMSLEEICDIPRHSTPPLSARYLPMIHGVQQTLVTLLMK
RQAATQIQSSRISSSFSEGDATIKACSESMKRSFNECSVSRPSTSPSCSLTEEFDSAISK
RDENSKDLTDENQGCPDTTMILRSQHTKFVPAEGTKKKPRKSRCSQLSLRSFFQKSPNLS
SGAENSSTNASPSQAEPNTSSYSNGSHALGDKSSSPRHCQLNPSAGSQYQDKGNDGLLKR
EKNNVALLEWQRIQQLMRNSIPVCKGHKEPCVARIVKKPGPTFGHRFFVCSRAEGPVSNP
EANCGYFKWASSKSQRK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggggaacccaataaagatagtatcttacaacgttaatggcctaagacaacgagtctcg
caatttgggtctctttcaaacctcctaaacactttcgatgcagacatcatttgctttcag
gaaacaaaattaagaagacaagaattaacatctgatttagtaatagctgatgggtatgaa
tcttttttttcttgcacgcgaactaaagataaaggccgtactgggtactctggggttgca
acattttgtcgtgtaaagtctgcattttcgagtactgaagtggcattgccggttgcggca
gaggagggttttactgggttcattgaccggtgtaaaagaaaagaagggcttgaggagttt
gagaaagatgagcttgttaaggttgatagtgagggacggtgtgtcgttactgatcataat
cattttgttctttttaacttatatgggcctagagcagcccatgatgatacagagagaatt
gagtttaagatgaagttttttaagatattacagaaaagatgggagaatcttctgcatgag
ggaaggagggtattcgttgttggtgatctcaatattgcacctactgctatggataggtgt
gatgcagatccagattttgagaagaatgaattcagaagatggttcaggtccatgctaatg
atgtcaggtggcctctttgttgatgttttccgaggaaaacatcctgacagaagagaagca
tacacgtgctggtcatcaagtacaggtgctgaactatttaattttgggagtaggattgac
catattctgtgtgctggaccatgcttgcatcaagagcatgacttgcaaggccataacttc
ttatcctgccatgtcaaggaatgtgacatattgacacagtataaacgctggaaacctgga
gacacaactaggtgggagggagggcggggcatcaaattggaaggttcagatcacgctcct
gtttatatgagtttggaagaaatctgtgatatacccagacatagcactccacctttatct
gctagatatctgcccatgattcatggtgtccagcaaactcttgtgaccttgttgatgaaa
aggcaggctgctacccaaattcaatcctccaggatatctagttcattttcagaaggagat
gctaccataaaggcatgcagtgaaagcatgaaaagatcatttaatgaatgcagtgtatct
cgcccatctacaagtccgtcatgttctttgactgaagagtttgatagtgccatttccaaa
agagatgagaattccaaggatttgactgatgagaatcagggctgtcctgacactacaatg
atactgcgaagtcagcatactaagtttgtgcctgctgagggaaccaagaaaaaaccaaga
aaaagtcgatgttcccagctctccctcagatctttttttcagaaaagtccaaaccttagc
tctggtgctgagaactcttctactaatgcttcgcctagtcaggcagaaccaaacactagc
agttactcgaatggttctcatgcactgggtgataaaagcagcagtcccaggcattgccaa
ctgaatccaagtgcaggatctcagtatcaagataagggaaatgatggcttgcttaagaga
gagaaaaataatgttgctttgttggaatggcagaggatacagcagctcatgaggaatagt
attcctgtttgcaagggtcacaaggaaccctgtgttgctcggatagtaaagaaaccaggt
cctacttttggccacagattttttgtctgctcacgagctgagggacctgtatccaatcct
gaagcaaattgtggctacttcaaatgggcttcttcaaaatcccagcgcaaatga
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