Populus nigra (Lombardy poplar): 133672285
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Entry
133672285 CDS
T10372
Name
(RefSeq) tRNase Z TRZ3, mitochondrial
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnz03016
]
133672285
Enzymes [BR:
pnz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
133672285
Transfer RNA biogenesis [BR:
pnz03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
133672285
Prokaryotic type
133672285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
133672285
NCBI-ProteinID:
XP_061948650
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Position
1:complement(33309371..33316880)
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AA seq
941 aa
AA seq
DB search
MSHISNLRLLLSPLNPTSRFPFSSKHRPYSLLTILSSSSPHPKRRHRTTPNHPSLNFRSR
SKTTSRETRDGDKGQSMDESGKENFGFNKKRAEGRDNPKRNLQLKVRKLNPINTISYVQI
LGTGMDTQDTSPSVLLFFDKQRFIFNAGEGLQRFCTEHKIKLSKIDHIFLSRVCSETAGG
IPGLLLTLAGMGEEGMSVNIWGPSDLKYLVDAMKSFIPHAAMVHTKSFGSNNVGLVDANK
FIDPIVLINDEIVKISAILLRPSQSQGSALKPGDMSVIYLCELPEIMGKFDPEKAKALGL
KPGPKYRELQSGRSVMSDLQSIMVHPSDVMDPSVPGPIVLLVDCPTESHVQELLSLESLN
NYYVDFSGNPTQSGKTVNCIIHLSPASVTSSPTYQKWMKKFGSAQHIMAGHEMKNVEIPI
LKSSARIAARLNYLCPQFFPAPGFWSLTHLNNSRPDSILSGEGCVSKLCENTSAENLLKF
TLRPHAHLGFDKSNIPSLMAPSEIINELLTEIPEIVDAAQQVRKFWSGPGGLEADMNAIQ
GNKIFTEEPWLEENTLPSCLENIRRDDLEVVLLGTGSSQPSKYRNVTSIYINLFSKGSLL
LDCGEGTLGQLKRRYGVEGADNAVRNLRCIWISHIHADHHTGLARILALRRDLLKGMTHE
PVLVVGPWQLKKFLDAYQRLEDLDMQFIDCRSTTEASWVAFEDDSESKKDDMSLGSPNNF
AEMKNPTLNTESNLFARGNRMQSYWKRPGSPVYNGMVFPSLKRLKEMLSEAGLEALISFP
VVHCPQAFGIALKAAERINTVGKVIPGWKIVYSGDTRPCPELVEASRGATILVHEATFED
ALVEEAIARNHSTTEEAIEVGNSAGAYRIILTHFSQRYPKIPVFDETHMHKTCIAFDMMS
VNIADLPVLPRVLPYLKMLFRNEMVVDESDDAVDAASAVAN
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacatctcaaatctgcgcctcctcctctcccctctaaatcccacttcccgtttc
cccttctcttctaaacacagaccttattctctactcaccatcctctcttcttcatctcct
catccaaaacgacgacaccgtaccacgccaaaccacccgtctcttaatttcagaagcaga
agcaaaactacgtctagagagaccagagacggagacaaagggcagtcaatggacgagagt
ggcaaggagaattttgggtttaataaaaaaagggctgagggtagagataatcctaaaagg
aatttacagttgaaagtcagaaagctcaatcctatcaatactatttcttatgtgcagatt
cttgggactggaatggacactcaggatacttcaccttctgtcttgctcttctttgacaag
caaaggtttatttttaatgctggagagggattgcaacgattctgcacggagcataagatt
aaactatcgaagatagatcacatatttctctctcgtgtctgctcagaaacagctggtgga
attccaggtttgctgttaactttggctggcatgggtgaagaaggaatgtcagttaacata
tggggtccatcagatctcaagtatttggttgatgcaatgaagtctttcattccccatgct
gccatggttcacacaaagagctttggttccaataatgttggtctggtagatgcaaataag
tttatagaccccattgttcttattaatgatgagattgtcaaaatatcagcgattctctta
cgaccaagccagtcacaaggatctgctctaaagcctggagatatgtctgtgatatatctt
tgtgagttgccagagattatgggcaaatttgacccagaaaaagctaaagctcttggtctg
aaacctgggccgaaatatagggaattgcaatcaggaagatcagtgatgtccgacctccaa
agtataatggttcatcctagtgatgtgatggacccttctgttcctggtcccattgtatta
cttgttgactgccctacagaatctcatgtgcaggaattgttatctttggaatctctcaac
aattactatgtggatttctcaggtaacccaacacaaagtggtaagactgtgaattgcatc
attcatctaagtcctgcttctgtaacaagcagccccacttatcagaagtggatgaagaaa
tttggttcagcccagcacattatggcaggacatgaaatgaagaatgtggaaattcctatt
ctaaaatccagtgcaagaattgcagcacgacttaattacttgtgtcctcagttctttcca
gctcctggattttggtcgctcacacatcttaacaactcaagaccagactcaattctttcc
ggcgagggttgtgtctcaaagttgtgtgaaaacacatcagctgagaatctcctcaagttc
actttgcgtcctcatgctcatcttggcttcgacaaatctaatattccaagtttgatggct
ccctcagaaattatcaatgagttgctcactgagattccagagattgtggatgctgcccaa
caggtgcgcaagttttggagtggacctggaggattggaagcagacatgaatgctatccag
ggtaataagatctttaccgaagagccatggttggaagagaatactcttcctagttgcttg
gaaaatataaggagagatgacctggaggtggtccttttggggacgggatcatctcagcct
tctaaataccgaaatgttacttctatctatattaatctcttctccaaaggaagtttgctc
ctagattgtggggaaggaaccctgggacaactaaaaagaaggtatggtgtggagggtgct
gataatgccgtgagaaatttaagatgcatttggatttctcatattcatgcagatcaccat
actggattagcaagaatacttgctctgcgacgtgacttgttaaaaggcatgacccatgaa
cctgtacttgttgtggggccttggcagctcaagaaatttctagatgcatatcaaagacta
gaagacctggatatgcaattcattgattgtaggagcaccactgaagcttcatgggttgct
tttgaggatgatagcgaatcaaaaaaggatgacatgtctctaggaagtccaaataatttt
gcagagatgaaaaatcctactctaaataccgagtcaaatttgtttgccagaggaaaccgt
atgcagagttattggaagagacctggcagtccagtttataatggcatggtttttccaagt
ctgaagagattgaaggagatgctcagtgaagcagggctggaggctttgattagttttcct
gttgttcactgccctcaggcatttggtattgccttgaaggctgcggagagaatcaacact
gttggaaaagtgataccaggttggaagattgtgtactcaggtgataccaggccttgtcca
gaactggtagaagcatctcgtggagcaaccattctcgtacacgaggcaactttcgaggat
gcattggtggaggaagctatagccagaaaccacagcacaacagaggaagccatagaagtg
ggaaactcggctggtgcataccgcatcatccttacccacttcagccaaagatatccaaaa
attcctgtatttgatgagacgcatatgcataaaacatgcattgcttttgatatgatgagt
gtaaacatagcagatttgcctgtgcttcctagagtgcttccataccttaaaatgctcttt
agaaatgagatggtagtggatgaatcagatgatgctgtagatgctgcaagtgcggttgct
aattag
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