Populus nigra (Lombardy poplar): 133672302
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Entry
133672302 CDS
T10372
Name
(RefSeq) probable splicing factor 3A subunit 1
KO
K12825
splicing factor 3A subunit 1
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03040
Spliceosome
Brite
Spliceosome [BR:
pnz03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
133672302
Complex B
133672302
Complex C
U2 SnRNP specific factors
133672302
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Gene cluster
GFIT
Motif
Pfam:
PRP21_like_P
Surp
ubiquitin
Motif
Other DBs
NCBI-GeneID:
133672302
NCBI-ProteinID:
XP_061948663
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Position
14:complement(6476508..6480672)
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AA seq
806 aa
AA seq
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MPAAAILSLPAPPVNGDGSPPPPSQVIEQQPREGKPENEEQNRAPVATHTRTIGIIHPPP
DIRSIVDKTSQFVAKNGPEFEKRIIANNANNAKFNFLNPSDPYHAYYQHRLTEFRAQNQA
PGQQPTSQPADSAAPDSATKPDLATDSNEAATKPDPAAQFRLPPPKVLEPPEAEQYTVRL
PEGITGEELDIIKLTAQFVARNGQTFLTGLTNREMNNPQFHFLKPTHSMFTFFTGLADAY
SKVLMPPRGLTEKLTKSVDDMTTVLERCLHRLEWERSQEQARQKAEDEIEQERMQMAMID
WHDFVVVETIDFADDEDEDLPPPMTLEEVIRRSKISAMDEDEIIEPGKEMEMEMDEEEMQ
LVEEGMRIASIEENDGEKDTRTNEEPEPPMRIVKNWKRPEERIPAERDPTKFVVSPITGE
LIPISEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPDIFGTT
EEEVSNAVKAEIEKKNDEQPKQVIWDGHLGSIGRTANQAMSQNAGDDQNEAVNNDARNLP
GPAAPPPRPGVLPVRPLPPPPGLQLNLLRAPPNTVQYSGPAGGAYPVPPQRPVGIPMMQP
NYPPPPPMQMASGQQPIMVNRPPPMPPSMSGNPSMHVPPPPGSQYNSMAVHRPFVPLHVP
QPGLPMMPPPPPLPQGMPPPPPPEDAPPPLPDEPEPKRQRLDDSALVPEDQFLAQHLGPV
RITVAVPNLDEGNLKGQVLEIMMQSLSETVGSLKEKIAGEIQLPANKQKLSGKAGFLKDN
MSLAYYNVGPGESLSLSLRERGGRKR
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgcagcaatcttatcgcttccagcacctcctgttaatggagacgggtctcct
cctccaccatcccaagtgatagaacagcagccaagggaaggtaaaccggaaaatgaggag
cagaacagagcaccagttgcgacccatacgagaaccattggaattattcatcctccaccg
gatattaggagtattgttgataaaacctcgcagtttgtggcaaaaaatggacctgagttt
gagaagaggattattgcaaacaatgctaataatgccaagttcaattttttgaatccatcg
gatccatatcatgcttattatcagcatcgtttgacagaatttcgtgcacagaatcaagct
cctggacagcagcctacttcacagcctgcggattcagctgcccctgattcagctacaaaa
cctgatttggctactgattcaaatgaagcagctaccaaaccggatcctgcagcccagttt
agactacctcctcctaaggttcttgaacccccagaagcagagcagtatactgttcggctt
ccagaaggaattactggagaggaacttgatattattaagctcacggctcagtttgtagct
cgaaatgggcaaacattcttgactggattgacgaacagggagatgaacaatcctcagttc
cactttttgaagccaacccacagcatgttcaccttttttactggacttgctgatgcatat
tctaaagttttgatgcctcccaggggtttgactgagaagctgacaaagagtgttgatgac
atgaccactgtgcttgaaaggtgcttgcatcgccttgaatgggaacgctcacaggagcag
gcaagacagaaagctgaggatgagattgaacaggagcggatgcaaatggcaatgattgat
tggcatgattttgttgtggttgagactatcgactttgcagacgatgaagatgaggacttg
ccccctccaatgacacttgaggaggttatacggaggagtaagatatctgctatggatgaa
gatgaaatcattgagcctggaaaggagatggaaatggaaatggacgaggaagagatgcag
ctagttgaggaaggcatgaggattgcaagtatcgaagagaatgatggtgagaaagacaca
aggacaaatgaggaaccagaaccacctatgaggattgtgaaaaattggaagagacctgag
gagaggatccctgctgaaagagacccaacaaagtttgttgtttcccctatcactggtgag
ctaattcccattagtgagatgtccgagcatatgagaatttccctcattgatcctaagtac
aaggagcaaaaggaaaggatgtttgccaagattcgggaaactactcttgctcaggatgat
gagatctcccgaaacatagtgggacttgcacgattacgtcctgatatctttggcacaacg
gaggaagaagtttctaatgctgtgaaggctgaaattgagaagaagaatgatgagcagccg
aagcaggtcatatgggatggtcacttgggaagcattgggcgcactgcaaaccaagctatg
tctcagaatgctggtgatgatcaaaatgaagctgttaataatgatgcaaggaaccttcca
ggcccagcagctccccctccccgacctggtgtgctgccagtccgtcccctccctccacca
ccaggactgcagttgaatcttcttcgtgcacctccaaatacagttcaatattctggtcca
gctggtggggcatatcctgtacctccacaaaggccggtcggtattccaatgatgcagcca
aattacccccctcctcctccaatgcaaatggcatctggacagcaacccattatggtaaat
cgaccaccccctatgcctccatctatgtctgggaatccaagcatgcatgtgccgcctcca
cctggatctcaatataattctatggcagttcatcgaccttttgtccctcttcatgtaccc
caacccggattgcctatgatgcctccaccacctcctttgcctcaaggaatgcctccacca
cctccacctgaggatgctcctcctccacttccagatgagccagagcccaagaggcagagg
cttgatgattctgcgcttgttccagaagatcagtttctggctcaacatctgggacctgtg
cgcatcactgttgccgttcccaatcttgatgaaggaaatctcaaagggcaagttctggag
attatgatgcagtccttgtccgaaactgttggcagcctgaaggaaaaaattgctggagag
atccaacttcctgccaacaaacagaaattgagtggaaaagctggttttctcaaggataat
atgtcacttgcatattacaatgttggaccaggagagtctctgtctctctctttgagagag
cgtggtggtagaaagagatga
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