Populus nigra (Lombardy poplar): 133672448
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Entry
133672448 CDS
T10372
Name
(RefSeq) eukaryotic initiation factor 4A-3-like
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03013
Nucleocytoplasmic transport
pnz03015
mRNA surveillance pathway
pnz03040
Spliceosome
Brite
Enzymes [BR:
pnz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133672448
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
133672448
mRNA cycle factors
Stress granule specific factors
133672448
Spliceosome [BR:
pnz03041
]
Complex C
Other components
EJC/TREX
133672448
Ribosome biogenesis [BR:
pnz03009
]
Eukaryotic type
90S particles
Helicases
133672448
Translation factors [BR:
pnz03012
]
Eukaryotic type
Initiation factors
eIF-4
133672448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133672448
NCBI-ProteinID:
XP_061948856
LinkDB
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Position
14:complement(6571979..6576771)
Genome browser
AA seq
407 aa
AA seq
DB search
MATSGVPAGRSARRAAAEDEKLVFETTEGIEPVASFDEMGLKEDVLRGIYNYGFEKPSAI
QQRALMPIIKGRDVIAQAQSGTGKTSMIALTACQLVDTANREVQALILSPTRELAEQTEK
VITAIGENINIQVHACIGGKSVGEDIRKLEYGVHVVSGTPGRVCDMIKRRSLRTRAIRVL
VLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPNEILEITSKFMTDPVKILVKRD
ELTLEGIKQFFVAVEKEEWKFETLTDLYDTLTITQAVIFCNTKRKVDWLTAKMVEFNFTV
SAMHGDMPQRERDAIMSNFRLGETRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHR
IGRSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNIGDLI
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggccacaagcggagtaccggctgggcggagcgctaggagggctgcggcggaggatgaa
aagttagtgtttgagacgacggagggaatagaacctgttgcaagtttcgatgagatggga
ttgaaagaagatgtactgagaggaatttataattatggatttgaaaagccgtcagcgata
caacaaagagctttaatgccaataattaaagggcgtgatgttatagcacaagctcaatct
ggtactggaaagacctctatgattgcccttactgcttgtcagcttgttgatactgctaac
agagaggtccaggcactgatattgtcacctacaagggaactggcagagcagacagagaaa
gtgataacggcaattggtgaaaacattaatatacaagtacatgcatgcattggaggcaaa
agcgtgggcgaggatattcgaaaactagaatatggagttcatgtagtctctggaactccg
ggcagagtctgtgacatgatcaagagaaggtcattacgtactagagccatcagagtacta
gttcttgatgaatctgatgagatgttgagcagagggttcaaggatcaaatttatgatgtt
tacagatatcttccacccgagcttcaggttgtcctgatttctgccactcttcctaatgaa
attctggagattacaagcaagttcatgacagatcctgtaaagattcttgtgaaacgtgat
gagttgactttggagggcatcaagcaattttttgttgctgtggaaaaagaagaatggaaa
tttgagactctgactgacctttatgatactcttaccatcactcaagctgttattttctgc
aatacaaagcggaaggttgattggttaaccgccaagatggttgaatttaactttactgtc
tcagcaatgcatggtgacatgcctcagagggagagagatgcaattatgtctaatttccgt
ctgggtgaaactcgtgtactgatcacaactgatgtttgggctcgggggcttgatgttcaa
caagtttctttggtgatcaactatgaccttccaaacaatcgagagctttacattcatcga
attggtcgttctggtcgttttggacgtaagggtgttgccattaattttgtcaaaagtgat
gatatcaggatcttaagagatattgagcagtattacagcacccagattgatgaaatgccg
atgaatattggtgatctgatataa
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