Populus nigra (Lombardy poplar): 133672464
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Entry
133672464 CDS
T10372
Name
(RefSeq) LOW QUALITY PROTEIN: protein CHROMATIN REMODELING 24-like
KO
K20093
DNA excision repair protein ERCC-6-like [EC:5.6.2.-]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pnz03036
]
133672464
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
133672464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_34
Motif
Other DBs
NCBI-GeneID:
133672464
NCBI-ProteinID:
XP_061948871
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Position
14:3037534..3047394
Genome browser
AA seq
1097 aa
AA seq
DB search
MADLSQSTHRKPVSLNDRHYRLLQDLSAPPKQPPPPPPVTSFEEEEESVFNEKFDGRRRI
CKAESEDDNIPKFCEITDFDSSPEEEKPTKVRIEGRRRLCKVSSGDDGDDASREEVKDDS
SFDDIADFDSPIPSKSVGDSDNNKGGNKIKDILSDLTXRLDLLSIEKKRVPENNNVVKKV
HVVEYASAESLFSLSSSPSDASLDVIKNSGGDDESAVNEYEEGDLLSESFDDEVSRGLKK
NKYGRVDEKFVPVGKPFVSNVVEDESDVQIESNHDEYVTRVEKTKKVTQRVKENEPDGFN
ERLRSVGRSSVLSLRDESEDDEDDFVVLTGKKVVKKVGRPGAIAKYNVLSGESETAVLEN
HAESEDDGSIILPGLKSTYKLPGKIAKRLYPHQCEGLRWLWSLHCKGKGGILGDDMGLGK
TMQICSFLAGLFHSKLIKRVLVVAPKTLLTHWIKELSVVGLSGKTREYFGTSLKARDYEL
QYILQDKGILLTTYDIVRNNSKSLRGDHYFLDEDSYIWDYMILDEGHLIKNPSTQRAKSL
IEIPSAHCIVISGTPIQNNLRELWALFNFCCPDLLGDNKWFKQTYEHPILRGNEKNASDR
EKRIGSTVAMELRERIQPYFLRRMKNEVFKEDDATTAKLSRKNEIIVWLRLTACQRQLYE
AFLRSEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDLLEGMESMLNPEDVAVAEKL
AMHVADVAERIDFQEKHDSISCKISFVLSLLDNLIPEGHNVLIFSQTRKMLNLIEESLVS
NGYEFLRIDGTTKVTDRAKIVDDFQEGNGAPIFLLTSQVGGLGLTLTKADRVIVVDPAWN
PSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFRTATENKEQIRYFS
QQDLRELFSLPKQGFNISLTQQQLHEEHDSQHKMDEYLESHIKFLESQGIAGVSHHSLLF
SKTETVQLAQEEEDEIRKKVSTVVGNSSSSYSLERNVDGAARAFNPKDVNLNKKTSSPVS
GGKLTESEILERINRLSQLLGNKVTVLRLPDQGAKLQKQISELNSVLIELRMEKATERQG
VISLDDLTGEFERGLNV
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggcggatctttcacaaagcacacacagaaaaccagttagtctgaacgatcgccattat
cgcctccttcaagacctctctgctcctcccaaacaaccaccgccgccgccgccagtaacg
tccttcgaggaagaagaagagagcgtattcaacgagaagttcgacggacgacgtcgtatt
tgcaaagcagaatcagaggatgataatatccctaaattctgtgaaatcactgattttgat
tcttcacctgaagaagaaaagcctacgaaggttaggattgaaggaagacggagactttgc
aaagtatcttctggagatgatggggatgatgcaagtagagaggaagtgaaagatgattct
agttttgatgatattgccgattttgattcacccattccgtctaaaagtgttggtgatagt
gataataataagggtggtaataagataaaagatattcttagtgatttgacctaaaggctt
gaccttttgtcaattgagaaaaagagagttcctgaaaataataatgtggtcaagaaagtt
catgtggttgaatatgcaagtgctgagtctttgttttctttgtcgtctagtccatctgat
gcctcattggatgttattaaaaacagtggaggtgatgatgagagtgctgtgaatgagtat
gaggagggtgatttattgagtgagtcatttgatgatgaggttagtagagggctaaagaag
aacaaatatggaagggtggatgaaaagtttgtccctgtgggaaaaccttttgtgtccaat
gttgtagaagatgaaagtgatgtgcagattgagtctaaccatgatgaatatgtaactagg
gtggagaaaactaagaaagttactcaaagagtgaaggaaaatgaacccgatgggttcaat
gagagattgaggtctgtaggacggtcttcggtgcttagtcttcgagatgaatcagaggat
gatgaagatgattttgtggttttgaccggaaaaaaggtggtcaagaaagttgggagaccc
ggtgccattgccaagtataatgtattatctggtgaatctgagactgctgtgttggaaaat
catgcagagtcagaggatgatggttccattatcttgcctggactaaaatctacatacaag
ttacctggtaaaattgcaaaaaggctgtatccacatcagtgtgaaggtttaaggtggctc
tggtctttgcattgcaagggtaagggtggaatcttaggagatgacatgggcttgggaaaa
acgatgcagatttgtagctttctagcaggtctcttccattcgaaattgattaagagggta
ttggttgtggcccctaaaacactgctcactcattggattaaagaactatctgttgtgggg
ctttctgggaagactagagaatactttgggacctctttaaaagctcgggactatgagctg
caatatatacttcaggacaaaggaattcttctcacaacttatgatattgtgcggaacaac
tcaaaatctttacgaggggaccattactttctggacgaggatagttatatttgggactat
atgattctggatgagggacatctcataaaaaatcctagtactcagagagcgaaaagtttg
attgagataccaagtgctcattgtattgtcattagtggcactccgattcaaaacaatctt
agggaattgtgggctttgttcaacttctgttgtcctgatcttcttggtgacaacaagtgg
tttaagcaaacatatgagcatcccatacttcgtggaaatgaaaaaaatgcttctgatagg
gagaagcgtattggttcaacagttgcaatggaactaagagaacgcattcaaccttacttt
ttgcgccgtatgaagaatgaagtgttcaaggaagatgatgccacaactgctaaactttcc
cgaaagaatgagatcattgtgtggcttagactaactgcttgccagcggcaactttatgaa
gcctttttgcggagcgagattgttctctcagcttttgatggctcgccattggctgcacta
acgatattgaagaaaatatgtgatcacccgcttctcttgacaaaaagagcggctgaagat
ttgttagagggaatggagtccatgctaaatcctgaagatgttgctgtggctgaaaaattg
gccatgcatgttgctgatgttgctgaaagaattgactttcaagagaagcatgacagcatc
tcctgcaagatctcttttgtgttgtcgctactggataatttaattccagagggacacaat
gttcttatattctctcaaactcgtaagatgcttaatctcatcgaggaatctctggtgtcc
aatggttatgagttcttacgcatagatggtacgacgaaagttactgatagagcaaaaatt
gttgatgacttccaagaaggaaatggtgctcctatatttttgctaacatctcaggttggc
ggtctaggtcttacacttacgaaagcagatcgtgtgattgtggttgatcctgcttggaat
cctagcacggataaccaaagtgttgatcgtgcatatcgaattgggcaaaagaaggatgtg
gtcgtatacagattaatgacttgtggaactgttgaagagaaaatttatagaaagcagata
ttcaagggggggttatttagaacagcaactgaaaacaaagaacaaattcgatactttagc
caacaggatctgcgggagctattcagtctccctaagcaggggttcaatatttccctcaca
cagcaacaattacatgaagagcatgacagccagcacaaaatggatgagtatctggaatcc
cacataaaattcttggagagtcaaggtatagcaggagtcagtcaccacagcttactcttc
tcaaagacagaaactgtacagcttgcacaggaagaagaggatgagataaggaagaaagta
tccacagtggtgggaaattcatcgtcaagctattcacttgaacgcaatgttgacggggct
gctcgtgctttcaatcccaaggatgtaaatctgaacaagaaaacctcttctccagttagt
gggggcaaactgacagaatctgaaatcttagagagaatcaatcggctgtcacaattactt
ggaaataaggttaccgttttaaggttaccagaccaaggagcgaaactacagaagcagatt
agtgaattaaattcagtgctcatcgagctgaggatggagaaagcaacagagagacaagga
gtcatcagtctggatgatttaactggggaattcgaaagaggattgaatgtatag
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