Populus nigra (Lombardy poplar): 133673102
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Entry
133673102 CDS
T10372
Name
(RefSeq) transcription factor TCP21-like
KO
K16221
transcription factor TCP21 (protein CCA1 HIKING EXPEDITION)
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
133673102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnz03000
]
133673102
Transcription factors [BR:
pnz03000
]
Eukaryotic type
Other transcription factors
TCP
133673102
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GFIT
Motif
Pfam:
TCP
Motif
Other DBs
NCBI-GeneID:
133673102
NCBI-ProteinID:
XP_061949734
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Position
14:complement(6054248..6056522)
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AA seq
271 aa
AA seq
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MSDNSGAVNNGSLIDPQRNQPPGGGGGGGGGVTNGALVAKKPPSKDRHSKVDGRGRRIRM
PIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRAGGN
SNSISSLSSNNIHPVGSLEHKPLLGPAPFILGKRMRPEEDGNGGGKDDDGVSVGPTIGSL
MGPTATAGPGGFWALPARPDFWGFAAAAPPEMVVQPTAVQQSSLFMHQQHAAAMGEASAA
RVGNYLPGHLNLLASLSSGHGSSGRREDDHR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaacagtggcgctgtaaataacggatctttgatagacccacaaagaaaccag
ccacctggaggcggtggtgggggaggaggaggagttactaatggagctttagttgctaaa
aagccaccttctaaagaccgtcatagcaaagttgatggtcgtggaaggaggattcggatg
ccgatcatttgtgctgctagagtttttcagttgactcgtgaattgggtcataagtccgat
ggacaaactattgaatggctacttcgtcaagctgagccttcgattattgctgctactggt
actggaactactcctgctagtttttctactgtttctgtttcggttcgtgctggtgggaat
tcaaattctatatcttctctttcgagcaataatattcatccggttggttctttggagcac
aagcctttgttaggccccgcgccgtttatacttgggaaaaggatgcggccggaggaggat
ggtaatggtggtgggaaggacgatgatggggtttctgtgggccccacaattgggtcatta
atgggccccacagcaacagccgggcctggtgggttctgggctttgcctgccaggcccgat
ttttgggggtttgctgctgctgcaccgccggaaatggttgttcagccgactgcggtgcag
cagtcttcactgtttatgcaccagcagcatgctgcggctatgggagaagcgtcggcggca
agagtggggaattatcttcctggtcatttgaatttgctggcttctttgtcgagtggacat
ggaagttcaggaaggagagaggatgatcaccgttga
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