Populus nigra (Lombardy poplar): 133673173
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Entry
133673173 CDS
T10372
Name
(RefSeq) alpha-mannosidase isoform X1
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
133673173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133673173
Enzymes [BR:
pnz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
133673173
Membrane trafficking [BR:
pnz04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
133673173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Glyco_hydro38C2
Laman-like_dom
Glyco_hydro_57
Motif
Other DBs
NCBI-GeneID:
133673173
NCBI-ProteinID:
XP_061949848
LinkDB
All DBs
Position
14:complement(9413652..9423438)
Genome browser
AA seq
1011 aa
AA seq
DB search
MEKLERDLTWFDGWVLIAFVVVFGLHGTVVNGGYVDYNTGGGVVPGKLNVHLVPHSHDDV
GWLKTVDQYYVGSNNSIQGACVENVLDSVVESLRRDSNRKFVFVEMAFFQRWWVEQSEEI
QEQVRKLVDAGQLEFVNGGWCMHDEATCHYIDMIDQTTLGHRAIKEQFNKTPRAGWQIDP
FGHSAVQAYLLGTELGFDSVHFARIDYQDRAKRKDDKALEVIWRGSKTFGSSSQIFANAF
PVHYSPPNGFHFEVFDDFVPVQDNPLLDDYNVEQRVNDFINAAMTQANVTRTNHIMWTMG
DDFQYQYAESWFKQMDKLIHYVNKDGRVNALYSTPSIYTDVKNAANESWPLKTDDYFPYA
DTENAYWTGFFTSRPALKRYVRQLSGYYLAARQLEFLVGKKSTGPNTYRLGDALGIAQHH
DGVTGTAKQHTTNDYEKRLAIGALEAEASVSSALSCLVSNKSRDQCAKPALNFSQCQLLN
ISYCPPTEEAIANGKRLVMVLYNALGWNRTDVIRIPVNDPNLVVADSYGKHIETQYVTMD
NTTSNLRNFYLKAYGFPSIQVPRYWLHFQVSVPPLGWSTYFIASATGIGKRRNGLSVMDS
PQNDTIEIGSGNLKMSFSSMTGQLKRMYNSKTGVDVPIQQSYFWYGSSSERMQSSGAYIL
RPDGSPPHVVARSVPLQVHRGPLFDEVRQQFNSWIYQVTRVYKDQEHAELEYTIGPIPLE
DGVGKEVITRMTANMATEKVFYTDSNGRDFLKRIRDYRADWSLSVNEPVAGNYYPLNLGI
FTMDKRSELSVLVDRATGGASIEDGQLELMLHRRTLHDDSRGVNEALDESVCIGDECEGL
TIRGNYYLSINQVGAGAVWRRTTGQEIYTPLLAAFTQEKEETWKASHVATGTAMDSGYSL
PLNVALITLQELDDGSVLLRLAHLYEAGEDAAYSTLAKVELKKMFSGKAIKELKEMSLSS
NQEKSEMKKMTWKVEGDNGEQPSPVRGGPVDSSTLVVELGPMEIRTFLLQF
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcttgagagggatttgacatggtttgatgggtgggttcttattgctttcgtg
gttgtttttggcttgcatggtacagtagttaatggtggttatgtggattacaatactgga
ggtggagttgtgccaggaaagttgaatgtccatttggtaccacattcacatgatgatgtt
ggttggttaaagactgttgatcaatactatgttggatcaaataacagtattcagggtgct
tgtgttgagaatgtgctggattcagtggtggaatcattgcgtcgagattccaataggaag
tttgtttttgttgaaatggcttttttccagcgatggtgggtagaacaaagtgaggaaatt
caagagcaagtgaggaaacttgttgatgctggccaattggaatttgtaaatggtggttgg
tgtatgcatgatgaagcaacttgtcattacatagacatgattgaccaaacaactctaggt
caccgcgcaataaaggagcagtttaacaagactcctcgtgctgggtggcagattgatcca
tttggacattctgcagtgcaagcttaccttcttgggactgagcttggatttgattctgta
cactttgcaaggattgattaccaggacagagcgaagcgcaaagatgataaagctcttgaa
gttatatggcgtggatccaagacatttggttcttcctctcagatttttgccaatgccttt
cctgtacattatagtcccccaaatggttttcatttcgaagtatttgacgactttgtgcca
gtccaggacaacccccttttagatgactacaatgttgagcagcgggttaatgattttata
aatgctgctatgacccaagcaaatgtgacaaggacaaaccatattatgtggaccatgggt
gatgatttccagtatcaatatgctgagtcttggttcaagcagatggacaaattaattcac
tatgttaacaaggatggtcgagtgaatgctttgtattctacaccatctatctacactgat
gtgaaaaatgcagcaaatgagtcttggccactgaaaactgatgattatttcccttatgca
gatacggaaaatgcctactggactggcttttttactagtcgcccagccttgaagcgatat
gttcgtcagctgagtggatattatttggcagcacgacaactagagttcctggttgggaaa
aaatccactggtcccaacacatatagacttggagatgctttaggcattgcacagcaccat
gatggtgtcactggcactgccaaacaacacactacaaatgactacgaaaaacgccttgct
attggagccttggaggcagaagctagtgtgagttctgctctgtcatgcttggttagcaat
aaatcaagagatcaatgtgcaaaaccagcattgaattttagtcagtgtcaattactaaat
atcagttactgcccaccaacagaggaagctattgcaaatgggaagagattggtcatggtt
ttgtataacgctcttggatggaatcgcactgatgttattaggataccggttaatgaccct
aatctagttgttgctgattcctatggaaaacatatcgagacgcaatatgttaccatggat
aataccacaagcaacttaagaaacttttatttgaaggcatatggatttccatccattcaa
gtgccccggtattggctgcactttcaagtgtctgtgccaccactcggttggagtacctac
tttattgctagtgctactgggatagggaaaagaagaaacgggctctctgtgatggacagc
ccacagaatgataccattgaaatcggatctggaaatttgaaaatgtccttttcttcaatg
actggtcaactcaaacggatgtataattccaaaacaggggttgatgtgccaatacagcaa
agctacttttggtatggttcaagctctgagcgcatgcaatcttcaggtgcatatatctta
aggcctgatggttcccctccccatgttgttgcaagatcagtgcccctgcaggttcatcgt
ggaccactgtttgatgaggttcgccaacaatttaattcatggatctaccaggtaacaaga
gtttacaaagatcaagagcatgcagaacttgaatacactattggcccaattccccttgaa
gatggtgttggaaaagaggtcatcacaagaatgacagcaaatatggccacagaaaaggtg
ttttatactgattctaatggaagggactttctaaagcggattcgagactacagagctgac
tggagcctctcagtcaatgaacctgttgcaggaaactattatccacttaaccttggaatt
tttacgatggataagagatctgaattatcagtcttggttgatcgtgccactggaggagcc
agcattgaagatggtcaactagaactaatgcttcataggcggactctccatgatgattcc
agaggagttaatgaagcccttgatgaaagtgtttgcattggagatgaatgtgaaggacta
acgattagaggaaattattatttgagcatcaaccaggtaggggctggagcagtctggcgc
cgaacaactggccaagagatttacacaccacttcttgcagctttcacacaggagaaggaa
gagacttggaaagcatctcatgtggccacaggaactgccatggattccggctacagcttg
ccactaaatgttgctttgataacccttcaggagctggatgatgggagtgttcttctccgt
ctggctcatttatatgaggcgggagaagatgctgcttattcaacactagctaaagttgaa
ctgaagaagatgttcagtggaaaagcaattaaggagctgaaggaaatgagcttgtcatca
aaccaagagaaatcagagatgaagaagatgacatggaaggttgagggagacaacggagag
caaccttcacctgttagaggtggtcctgttgatagttcaactctcgttgttgaacttggt
cccatggaaattcgcacgttcttgctacaattttga
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