Populus nigra (Lombardy poplar): 133673183
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Entry
133673183 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133673183
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pnz03009
]
133673183
04121 Ubiquitin system [BR:
pnz04121
]
133673183
Ribosome biogenesis [BR:
pnz03009
]
Eukaryotic type
90S particles
Other 90S particles
133673183
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
133673183
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Sof1
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
NBCH_WD40
ASA1
DSE1_N
Beta-prop_RIG_2nd
Beta-prop_DCAF4
PAC11
ANAPC4_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_IFT140_1st
eIF2A
PROPPIN
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
VID27
Motif
Other DBs
NCBI-GeneID:
133673183
NCBI-ProteinID:
XP_061949862
LinkDB
All DBs
Position
14:complement(669119..675729)
Genome browser
AA seq
452 aa
AA seq
DB search
MKVKVISRSTDEFTRERSQDLQRVFHNFDPNLRTQEKAVEYQRALNAAKLDKIFARPFIG
AMDGHIDAVSCMAKNPNYLKGIFSGSMDGDIRLWDIANRRTVCRFPGHQGAVRGLTASTD
GSTLVSCGTDCTVRLWNVPVATIMESGNSSACSSEPQAVYMGENAYWAVDHQWSGDLFAT
AGAQVDIWNHNRSQPVNSFKWGTDSVISVRFNPGEPNLLAASASDRSIMLYDLRVSSPAR
KLIMRTKTNSISWNPMEPMNFTAANEDCNCYSYDARKFDEAKCVHKDHVSAVMDIDFSPT
GREFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWK
AKASEQLGIILPREQRRHEYNEALKKRYKHLPEVKRIVRHRHLPKPIYKAGVLRRVMIEA
ERRKDHRRKAHSAPGSIVTEPMRKRRIIKEVE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgaaagtaatttcacgctctactgatgaattcactcgagaacgtagccaggat
cttcaaagagtgtttcacaatttcgacccaaacctaagaacacaagagaaagcagtggag
tatcagagggcacttaatgctgccaaattggataagatatttgcaaggccgtttattggc
gcaatggatgggcatattgatgcagtttcgtgtatggcaaaaaacccaaattacttaaaa
gggattttttctggttctatggatggagatattcgcctttgggatatagctaacaggaga
acagtttgtagatttcccggtcaccaaggtgctgtaagaggtctgactgcctctacagat
gggagtactcttgtatcatgtggaactgattgcactgtcaggctttggaatgttcctgta
gctactattatggaatcaggcaattcgtccgcttgttcatctgagccacaggcagtttat
atgggggaaaatgcatattgggctgttgaccatcaatggagtggtgatctctttgccact
gctggtgcccaagtagatatttggaatcataataggtctcagccagtgaacagttttaag
tggggaacagactcagttatctctgtccgatttaatccaggggaaccaaatctcttggct
gcatcagcaagcgatcgcagcataatgttgtacgacttacgcgtgtcatctccagcaagg
aaacttattatgaggacaaaaactaattctatttcttggaacccaatggagcccatgaac
ttcacagctgcaaatgaggattgcaactgctatagctatgatgcgagaaaattcgatgaa
gccaagtgtgtacacaaagatcatgtttctgcagtgatggatattgatttctcaccaaca
ggtcgggaattcgtaactggatcttatgatagaacagtaagaattttccagtataatgga
ggtcacagtcgagaaatctatcacacaaagagaatgcaaagggtattctgtgtcaagttc
agctgtgatgcaagctatgttatttcaggaagtgatgacacaaatctgaggttatggaaa
gctaaagcgtctgaacaattaggaattatactgccaagggaacagagaaggcatgaatat
aacgaagctctaaagaagcgctacaagcaccttcctgaggtcaagcgcattgtgaggcat
aggcacttgcccaaacctatatacaaggctggtgtccttagacgtgtaatgattgaagct
gaaaggagaaaagatcataggaggaaagctcacagtgccccgggaagcattgtaactgaa
ccaatgcgaaaaagaagaattattaaagaagttgagtga
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