Populus nigra (Lombardy poplar): 133673355
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Entry
133673355 CDS
T10372
Name
(RefSeq) protein transport protein SEC16B homolog isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133673355
Membrane trafficking [BR:
pnz04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
133673355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
133673355
NCBI-ProteinID:
XP_061950085
LinkDB
All DBs
Position
1:complement(36520125..36528174)
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AA seq
1408 aa
AA seq
DB search
MATNPPFNVMEDQTDEDFFDKLVDDDFGPPNLDSGSKFTEGSDSDEAKAFANLSIEDTKG
GFEGKVENDGAGLDGVKAEESNALESVNSLGLSDGVIESNNDGIGSEVVPETTVCQSSGS
LKSGVKEVGWGSFYADSADNGNHGFGSSSDFFNDFGGGSEDFPANIVQSASNVENRGGGG
LDNSVSYEQYQDGSQVYGGSVMESVNGLDLSSSQYWENMYPGWKQDANTGQWYQVDAFDA
TASMQGSADGALGVECVAASASISDGKKEVNYLQQTSQSVVGTVAETSTTESVSSWNPVS
QGNNNGYPEHMVFDPQYPGWYYDAMVGEWRTLDSYTPSAQSTTVQTNDQQNQNGFAFSNP
YSPNSSSMNAEYGQADKYGYQGYNSQGLHGSGGESYGSYNQQGLNMWQPQTAAKTDTISN
FGGNQQLENLYGSNVSMNNHVDQQNAFNYSGTVPSYDKASQGYAEANGFVGSQSFVHGGN
FSQKSNQETVKQNEQAIFSNDYFSSQKQASVPHQSFQSNQQFSYAPNTGRSSAGRPPHAL
VTFGFGGKLIVMKDSSSLRKTSFSSQDHVGGSIAVMNLMEIILGSSDNASSVGGGTCSYF
HALCQQSFPGPLVGGNVGNKELNKWIDERIAHCESLGVNQRKGEVLRLLLALLKIACQHY
GKLRSPFGTDNLLKESDAPESAVAKLFASAKKNSTHFSEYGALDHCLQNMPSEGQIRETA
SEVQHLLVSGRKKEALQCAQEGQLWGPALVLASQLGDQYYVDTVKLMALRQLAAGSPLRT
LCLLIAGQPAEVFSTDSNVHGGFPGDLSIPQQPVQFGANRMLDDWEENLAVITANRTKDD
ELVLMHLGDCLWKDRSEITAAHICYLIAEANFESYSDTARLCLIGADHWKHPRTYANPEA
IQRTELYEYSKVLGNSQFILLPFQPYKLIYAYMLAEVGKVSDSLKYCQAVLKSLKTGRAP
EVETWKLLVLSLEERIRAHQQGGFTTNLAPGKIVGKLLNFFDSTAHRVVGGLPPPAPSAS
QGSVPDSHHQLMAPRVSGSQSTMTMSSLISSASTEPISEWAADGNKMTMHNRSVSEPDFG
RSPIQDQADSSTQGTPSSTQSKASGSVGSSRFGRFGFGSQLLQKTVGLVLRPRSDKQAKL
GEKNKFYYDEKLKRWVEEGVEPTAEAAALAPPPTTLGFQNGGSDYNLKSALKNEVSLTDG
NSTFKSPTSTDHPSGIPPIPASSNQFSARGRMGVRARYVDTFNQGGGKPANLFQSPSVPS
VKPAVASNAKFFVPAPAPEYSMEAIAENIQEDSATTEKPSTFNAKENDYPQPSTSSSAMA
MQRFPSMDNITRKGGMINGKDLVSSNSRRTASWSGSFSDSFSPPKVMESKSPGEALGMTP
SPFMPSNQSMTRMPSSSSFGDELHEVEL
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atggctacgaatcctccatttaacgtgatggaggatcagacggatgaggatttctttgat
aagttagttgatgatgattttgggccccctaatttggattcgggctctaagttcacagag
ggaagtgattctgatgaggcgaaagcctttgccaatctcagtattgaggatacaaaaggt
ggattcgaggggaaggttgaaaatgatggtgcaggattggatggtgtgaaggcggaggag
agtaatgcgttggagtcagtgaattcgttgggcttgtctgatggggtgattgagtcaaat
aatgatgggattggatcggaggttgtgcctgagactactgtttgtcaaagcagtggatca
ctgaaatcaggggttaaggaagtggggtggggttcgttttacgcagattctgcggacaat
gggaatcatgggtttggttcgtcctctgatttttttaatgattttggaggcggttcagaa
gattttcctgcaaatatagttcaaagtgctagtaatgtagagaataggggtggtggaggt
ttggataattcggtcagttatgagcaatatcaagatggttcacaagtttatggaggatcg
gtgatggagagtgtgaatggactggacttgagtagcagtcagtattgggaaaacatgtat
cctggatggaagcaagatgcaaacactgggcagtggtatcaagtggatgcttttgatgct
acagcaagcatgcaagggagcgctgatggtgctttgggggttgaatgtgtggctgcttcg
gcctcaatctctgatgggaaaaaagaggttaattatttgcagcagacttcacagtctgtg
gtgggaactgtggctgagactagtacaaccgagagtgtgtctagctggaatccggtttcc
caagggaataataatggttaccctgaacatatggtttttgacccacaatatcctggttgg
tattatgatgcaatggtgggagaatggcgcacattggacagttacacaccatctgcacaa
tcaacaactgttcaaactaatgatcagcagaatcaaaatggattcgcatttagcaatcct
tattccccaaatagtagtagcatgaatgctgagtacggacaagctgacaagtatggctat
cagggctataatagccaaggcctacatggcagcgggggtgagtcttatggtagctacaat
caacagggtttgaatatgtggcaacctcagactgctgccaagacagatactatttcgaac
tttggtggaaaccagcaattagagaatttatatggttcaaatgtgtccatgaacaatcat
gtggatcagcagaatgcttttaattattcggggacagttccatcatatgacaaagcaagt
caaggttatgctgaggctaacggatttgttgggtcacaaagttttgtacatggcgggaac
ttcagtcagaagagtaatcaggaaactgtaaaacagaatgaacaagcaatcttttcaaat
gattactttagcagtcagaaacaagcaagtgttccccatcaatcatttcagagcaaccag
cagttttcttatgctcccaacactgggagatcatctgctgggcgtcctccacatgcactg
gttacttttggatttggtgggaagctcatagtaatgaaagatagcagttctcttaggaaa
acatccttcagcagccaggatcatgtaggaggctcaatcgcagttatgaatttgatggag
attattttaggaagtagtgataatgcttcaagtgttggagggggcacttgcagttatttt
catgctctctgccaacagtcctttccaggtcctttggtgggcggaaatgttggaaataaa
gaattgaataagtggattgatgagagaattgcacactgtgaatcacttggtgtaaatcaa
agaaaaggcgaagtattgaggttgcttctcgctttactgaaaatagcttgtcagcattat
ggaaaacttcgatctccatttggaactgacaatttattgaaggagagcgatgctccagaa
tcagcagttgcaaaactctttgcatctgccaagaagaatagcacacacttcagtgagtat
ggtgcccttgaccactgcttgcagaatatgccctctgaaggacaaattagggaaactgct
tctgaggtacaacatcttctggtttctggtagaaaaaaagaggctttacaatgtgcacaa
gaaggccagctgtggggaccagcacttgttcttgcatcacagcttggtgatcagtactat
gttgatactgtcaagctaatggcacttcgccagctggcagctggttctcctttgcgaaca
ttatgcttgctaatagcagggcaaccagctgaggtattttccacagattctaatgtacat
ggtggctttcctggtgatttgagtatccctcaacaacctgttcagtttggggcaaacaga
atgcttgacgactgggaagagaatttggctgtaataactgcaaacagaacaaaagatgat
gagctcgtgctcatgcatcttggagattgcctatggaaggatagaagtgagattactgct
gcacacatctgctatttgatagcggaagcaaactttgagtcatattcagacactgcaagg
ctatgcctaattggagcagatcactggaagcatccccgaacatatgctaatccagaggct
attcagagaactgagttgtatgaatactcaaaggtgcttggtaactcccagtttatcctg
ctaccgtttcagccgtataagctcatctatgcatacatgctggctgaagtgggcaaagtc
tctgattcacttaagtattgtcaggctgttttaaaatccctaaaaactggtcgagctcct
gaagtagaaacatggaagcttttagtattatcccttgaggaaaggattagagcccatcag
cagggtggattcaccacaaatttggctccaggaaagatagttggcaagttgctcaacttt
tttgatagcactgcacatcgtgttgttgggggcctgccaccacccgcaccatcagcatca
caaggaagtgtgccagatagccatcaccaactgatggctcccagagtatcaggtagtcag
tcaacaatgaccatgtcatctctaatatcttctgcttcaacagagcccataagtgaatgg
gcagctgatggcaataaaatgacaatgcataatagaagtgtttcagagccagactttggt
agaagtccaatacaggatcaggctgattcatctacacaaggaactccttccagcacacaa
agtaaggcatcaggttcagtggggtcatctcggtttggtcgttttggttttggatcacag
cttttgcagaaaactgtagggctagtcttaaggcctcgctcggataaacaggctaaattg
ggtgaaaagaacaaattttattatgatgaaaagctcaagagatgggtggaggaaggtgtt
gaacccacagctgaagcagcagccttggcaccccctccaacaactctaggcttccagaat
ggaggctctgactacaacttgaaatccgctttgaagaatgaagtgtctctgactgatggg
aactcaacgtttaagagtcccacttcaacagaccatccttcagggattccgcctattcca
gccagttcaaatcaattctcggctcgtgggcgcatgggtgtcagggcaaggtatgttgac
acctttaaccaaggtggtggaaaaccagcaaatctgttccagtccccgtctgttccatct
gtcaaacctgctgttgcttcaaatgcgaagttttttgttcccgcacccgcaccagaatat
tctatggaagctatagcagaaaacatacaagaagacagtgcaaccactgaaaaaccttct
acattcaatgcgaaggagaatgattatccacagccttccacgtcttcgtcagcaatggct
atgcaaagatttccaagcatggataacattacgagaaaggggggtatgataaatgggaaa
gacttggtttcatccaactcacgacgaacagcgtcatggagtgggagcttcagtgattca
tttagtcctcctaaggtgatggaatccaaatctccaggggaggctttgggcatgacccct
tcaccatttatgcctagcaaccaatccatgacgcgaatgcctagtagcagtagttttgga
gatgaacttcatgaagtggaactttaa
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