Populus nigra (Lombardy poplar): 133673453
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Entry
133673453 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133673453
KO
K14791
periodic tryptophan protein 1
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pnz03009
]
133673453
Ribosome biogenesis [BR:
pnz03009
]
Eukaryotic type
90S particles
Other 90S particles
133673453
Pre-60S particles
Other pre-60S particles
133673453
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
DSE1_N
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WDR55
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_NOL10_N
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT140_1st
PAC11
WD_LRWD1
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_WDR41
Beta-prop_NUP159_NUP214
ASA1
DNAI3_WD
Beta-prop_VPS8
CFAP251_N
WDR54
Motif
Other DBs
NCBI-GeneID:
133673453
NCBI-ProteinID:
XP_061950252
LinkDB
All DBs
Position
14:complement(13666537..13677197)
Genome browser
AA seq
489 aa
AA seq
DB search
MIAAVSWVPKGVAKSVPSVADPPSKEEIEELIKASDLERSGEDSGSEEDDQEMDVDAAKQ
TGEVSQALAVANALGRSSKVNKSETKFDDIADGLQELDMDNYDDEEEGIELFSTGLGDLY
YPSNSMDPYIKDEDDDDSEDLEDMAIKPKDAVIVCACNKDEFSNLEVWILDETSDGDSNI
YVHHEVPLSAFPLCTAWLDCPLKGGEKGNFIAVGSMEPAIEIWDLDIIDEVQPAVVLGGI
EEKKKKKKGKKVSIKYKEGSHTDSVLGLAWNKHFRNILASASADKQVKIWDVVAGKCDIT
MEHHTDKVQAVAWNHHEPQVLLSGSFDRSVVMKDGRLPSDPGFKWSVTADVESLAWDPHD
KHLFVVSLEDGTVQGFDIRAAKSGSASDLKPSFTLHAHDKAVCTISYNPLAPNLLATGST
DKMVKLWDLSNNQPSCLVSKNPKAGAIFSVSFSEDNPFLLAIGGSKGTLELWDTLSEAEV
ARRFGTTAS
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagcagtttcgtgggtacccaaaggggttgcaaagtctgtaccaagtgtagca
gacccaccttcaaaagaggaaattgaagagctgatcaaagctagtgatttagagagaagt
ggagaagatagtggcagcgaggaagatgaccaggaaatggatgttgatgctgccaagcag
accggtgaagtaagccaagcattagctgtagcaaatgcacttggcagaagttccaaagtt
aacaagtcagagaccaaatttgatgacatagcagatggtctgcaggaacttgatatggac
aactacgatgatgaggaggaaggtattgagctgttcagcacaggacttggggacctttac
tacccaagtaatagcatggacccgtacatcaaggatgaagatgatgatgattctgaagat
cttgaagacatggctatcaaaccaaaggatgcagtcattgtttgtgcttgcaacaaggat
gaatttagtaacctcgaggtttggatattggatgaaacaagtgatggtgattcaaacata
tacgttcaccatgaggttcccctttcagcatttcccctttgcacagcatggcttgattgt
ccacttaaagggggagaaaaagggaattttatagctgttgggtcaatggaacctgccatt
gaaatatgggaccttgacattattgatgaagtgcaaccagctgtggtattaggtggcatt
gaagagaaaaagaagaagaaaaaagggaaaaaggtgtcaattaaatacaaagaaggcagt
cacactgattctgtccttggcctcgcttggaacaagcatttcaggaacatccttgccagt
gctagtgccgacaaacaagtcaaaatttgggatgtggttgctggaaaatgtgacattacc
atggagcatcatacagacaaggttcaagcagttgcatggaatcatcatgagccacaagtt
cttctcagtggatcttttgatcgttcagtagtcatgaaggatggaaggttgccttcagat
cctggtttcaagtggtcggtcacagctgatgttgaaagcttggcctgggatccgcatgat
aagcatttatttgtggtgagtcttgaagatggtacagttcaaggttttgacatccgtgct
gccaagtctggatcagcttctgaccttaagccaagttttaccctccatgcacatgacaaa
gctgtttgcacaatctcttataatcctttagcacctaatcttcttgctactggatcaaca
gataaaatggtaaaactctgggatctgtcgaacaaccaaccctcatgtttagtatccaag
aatcctaaagcaggagctatcttttctgtttccttctcagaggacaacccttttctgctc
gctattggaggctccaaggggacattggaactatgggatacattgtctgaggccgaggtt
gctagaagatttggaaccacagcaagctga
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