Populus nigra (Lombardy poplar): 133673467
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Entry
133673467 CDS
T10372
Name
(RefSeq) ATP-dependent DNA helicase PIF1-like
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pnz03032
]
133673467
03029 Mitochondrial biogenesis [BR:
pnz03029
]
133673467
Enzymes [BR:
pnz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
133673467
DNA replication proteins [BR:
pnz03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
133673467
Mitochondrial biogenesis [BR:
pnz03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
133673467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
Pif1_2B_dom
AAA_22
DEAD
ATPase_2
AAA_5
SLFN-g3_helicase
AAA_16
nSTAND_NTPase5
ResIII
NPHP3_N
ABC_tran
Herpes_Helicase
DnaB_C
NACHT
AAA_14
UvrD-helicase
NB-ARC
T2SSE
NTPase_1
PhoH
AAA_7
Mg_chelatase
NAT10_TcmA_helicase
nSTAND3
TsaE
AAA_11
ATPase
cobW
ATP-synt_ab
Sigma54_activat
Myosin_head
UvrD_C_2
SRP54
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
133673467
NCBI-ProteinID:
XP_061950278
LinkDB
All DBs
Position
14:complement(9598960..9602807)
Genome browser
AA seq
537 aa
AA seq
DB search
MLSLLPFCFLEPLRSESKLLLYQKQTCDNAQRLYFSACKEKLECARSMKFFSSAIIAVYR
RSFSTKSSRTTKYAQENRIKKETNRIPKATKTHQPLFEWTQEQKNIFSHVHRGASVFITG
SAGTGKTVLLKHIIDILKDVHGKSKVFVTASTGIAACALQGQTLHSFANIGIQNADSGTL
LDKVKMNKHACKRWKKAKALVIDEISMISADLFESLEYIARDLRGSEVVWGGIQLIVCGD
FFQLPPVIKQQKLSGKEFAFEADCWNASFDLQVELTQVFRQSDPRLIKMLQGIRKGETDA
EDLQLLEESCSMNKQDSLVVWLYPRINDVEKVNEERMKSLGESTVTYAAADSGFEHRKKQ
LNQGIVPDQLVLCVGARVMLIMNLNIERNLCNGATGTVTGFVPVEDKNARKSDILFPQVK
FDRGPEIVIEPQKFEIFEGDIVVAWRYQIPLILAWAISIHKCQGMTLDHAQTDLSRAFGY
GMVYVALSRVRSLEGLHLSGFTPSKIKAHPKVLLFYKSFTSSNLSHTEFSLTRRVRK
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgctctctttgctgccgttttgcttccttgaaccattaaggtccgagtctaagctcctt
ctctatcagaagcagacgtgtgataacgctcaaagactctacttttcagcatgtaaagaa
aagcttgaatgcgctagaagtatgaagttttttagctctgcaataatagctgtatataga
agaagttttagcactaaaagcagcagaaccacaaaatatgctcaagagaatcgaatcaag
aaggaaaccaataggatccccaaggccacaaaaacccaccaacctttatttgaatggacc
caagaacaaaaaaatattttttctcatgttcacagaggtgcttccgtgtttatcacgggc
tccgccggaactggaaagacagttttgcttaagcacattatcgacattctgaaggatgtt
catggtaagtctaaggtttttgtcacggcatccactggaattgctgcctgtgcacttcaa
gggcaaacacttcactcctttgccaacattggaatccagaatgctgattctggaactttg
ctggataaggttaaaatgaataagcatgcttgcaaaagatggaaaaaggcgaaggcattg
gttatagatgaaattagtatgatcagtgctgatttgttcgagagcctggaatatattgct
agagatttacggggatcggaggtggtatggggtggaatacagcttattgtctgtggggat
ttctttcagctaccaccagttatcaaacaacagaaattatcaggcaaagaatttgcattt
gaagctgattgttggaatgcaagctttgacctgcaggttgagcttactcaggtttttagg
cagtcagaccctcggcttatcaagatgcttcagggaataaggaaaggggagactgatgca
gaggacttgcagcttctagaagaatcttgctccatgaacaagcaggattctttggtagtc
tggctctatccgagaattaatgatgtggagaaagtaaatgaggagagaatgaaaagcttg
ggtgagagtactgtaacttatgcagctgctgatagtggcttcgaacataggaagaaacaa
ctcaaccaagggattgtacctgaccaacttgtactctgtgtaggtgcaagggtaatgttg
atcatgaatttgaatattgaacgtaatctttgtaatggtgccactggtacagttacagga
tttgttcctgtggaggataaaaatgctagaaagtctgacattctcttcccacaagttaaa
tttgatcgtggacctgaaatcgtgattgaacctcaaaaattcgaaatttttgagggagat
attgtagttgcttggagatatcagatacctttgatattagcatgggctatcagcatacat
aagtgccaagggatgactcttgatcatgctcaaacagatctctcaagggcttttggctat
ggaatggtctatgtggcactttcccgagtacggagcttggaaggccttcatttgtctggt
ttcactccatcaaagatcaaggcacacccaaaagttctgctattctataaaagttttact
tcatcaaacctctctcatactgaattctcattaacacgccgagttaggaaataa
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