Populus nigra (Lombardy poplar): 133673639
Help
Entry
133673639 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133673639
KO
K13114
pinin
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03013
Nucleocytoplasmic transport
pnz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133673639
03015 mRNA surveillance pathway
133673639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnz03019
]
133673639
03041 Spliceosome [BR:
pnz03041
]
133673639
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
133673639
Spliceosome [BR:
pnz03041
]
Complex C
Other components
EJC/TREX
133673639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
133673639
NCBI-ProteinID:
XP_061950463
LinkDB
All DBs
Position
1:28712581..28717590
Genome browser
AA seq
424 aa
AA seq
DB search
MGSSSAVGKTEEELQREIDELHRQQRQISERLRDPRGLRRGGFSSAAAAAPRNFASNGAR
NRGFVRPADRNEVEDQPPAKRRLLSAVVKVEEDGEIIEDPARAEDVKKQQLAEEGNGDPA
KGTLADGKPTMLRQSGWSRRDVNQRAVKRVVETPVIEPVPRVLPKNQDPSLVSRNKRMLG
QLLGTLEKFRKEDMKLSGTEAFIQRSNALQRAEQKAREESERLRQQEREQIAEQRKKDLT
LRARIAAKAEEKKLELLFLRWSEHHKKLSNFIRTKAEPPIYYLSKKPLEKDATLLDQQRE
QAFLEWKAARREELSEYQKQIGDQHLGYVEKELERWQNARKVRRANNDANLQETMDKELD
THRLEHGPKTRKIPGGSNNEDEDDVEDINVGEDDLMDDVLVVDDNSRRVDEVAQPEPNDT
SPPS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgggtagtagcagtgctgtagggaaaacggaggaagagctccaacgagagatcgatgag
ctccatcgccaacagcgccagatttcggagcgccttcgtgatcctcggggacttcgaagg
ggaggcttttcctccgccgccgccgccgcccctcgaaacttcgcttctaatggtgctcgt
aatcgcggctttgttcgaccggctgataggaacgaggtagaagatcaacctcctgcgaaa
aggcgacttttatctgctgttgttaaggtggaggaggatggagagatcattgaggatcct
gccagagcagaggatgtgaagaagcagcaattggctgaggaaggaaatggtgaccctgct
aaagggactctggctgatggaaagcctaccatgttaaggcaaagtggttggtctaggaga
gatgtcaatcaaagagcagtgaagagggtggttgaaactccagtgattgagcctgttcca
agggtgttacccaagaatcaggatccaagcttggttagcagaaacaaaagaatgctgggg
caacttttaggtactctggagaaattcaggaaagaagatatgaaactttcaggcactgaa
gcatttatacaaaggtcaaatgccttgcaaagagctgaacaaaaagcacgtgaagaaagt
gaaaggctgaggcaacaagagcgtgaacaaattgctgagcagaggaagaaagatctgact
ctcagagcacgcattgctgcaaaggctgaagaaaagaagttggaattgctgtttcttcgc
tggagtgagcaccacaaaaaacttagcaattttataaggaccaaggcagaacctccaatt
tattatttgtctaaaaagccgttggaaaaggatgccaccttacttgaccagcaaagagaa
caggcatttttagaatggaaagctgctaggagagaggaattatctgaatatcagaagcag
attggggatcagcatctgggctatgtggaaaaggagttggagaggtggcaaaatgcaaga
aaagtgaggagagcaaacaatgatgcgaacttgcaagaaacaatggacaaagaactggat
acccacaggcttgagcatggtcccaagacaagaaagatacctggtggaagcaacaatgaa
gacgaggatgacgtggaggatatcaatgtcggggaggatgacttgatggatgatgttctg
gtggttgatgataacagcaggagggttgatgaggtagcccagccagaacccaatgatacc
agccccccctcctaa
DBGET
integrated database retrieval system
