Populus nigra (Lombardy poplar): 133673668
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Entry
133673668 CDS
T10372
Name
(RefSeq) polyprotein of EF-Ts, chloroplastic
KO
K02357
elongation factor Ts
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pnz03012
]
133673668
03029 Mitochondrial biogenesis [BR:
pnz03029
]
133673668
Translation factors [BR:
pnz03012
]
Eukaryotic type
Elongation factors
133673668
Prokaryotic type
133673668
Mitochondrial biogenesis [BR:
pnz03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
133673668
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_TS
S1
EF-Ts_N
S1_RRP5
RNase_II_C_S1
Motif
Other DBs
NCBI-GeneID:
133673668
NCBI-ProteinID:
XP_061950498
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Position
15:complement(9738810..9745622)
Genome browser
AA seq
1096 aa
AA seq
DB search
MTPVLPCSTSNICLIPGTAFSIKKNNSLKNGSLSRKSTKYASSSQRLVLPLPGFVKLFPQ
YHRDCAMVHRSVASTVSATGTDVAVEEPDSPVVDKDSDGVTEIPAADAVETIDSSTKAGS
SPAPAQSSRSKGSRKSEMPPVKNEDLVPGATFTGKVRSIQPFGAFVDFGAFTDGLVHVSK
LSDSFVKDVGSVVSVGQEVKVRLVEANTETGRISLTMRENDDMSKFQQRNDSPATGSSNR
QAARRNTSKPNQRKEEVKSSKFVKGQNLEGTVKNLTRSGAFISLPEGEEGFLPRSEESDD
VFAGMMGDSSLQIGQEVSVRVLRITRGQVTLTMKKEDADKLDTELIQGIVHTATNPFVLA
FRKNKDIAAFLDEREIATEQPEKPIPSVQIGEKNQTEPLPNIAEVQDQPVSSDEVSSSIP
SMVDESVEGDETSLKEVVVGANVASDEKQPETVESSVDSTVQTVEKEAEVTGYKEPESIE
SSTPQNVDDTVQTLEKKAVADDDKEPESMESSTSQNVDDTVQALEKEAEANDKEPESIES
SLSQSVDDSIAGSDKVESIENSDASGDTSEAQIISSESLTSEEVVENQVKSTEDEMQIQT
PAAETEITSASQLEDKKVEPAPEINGTVGASNGQSGSLSPKESVTTATISPVLVKQLRED
TGAGMMDCKKALSETGGDIVKAQEFLRKKGLASAEKKASRATAEGRIGSYIHDSRIGVLV
EANCETDFVSRGDIFKELVDDIAMQVAACPQVQYLVTEDVPEDILNKEKEIEMQKEDLLS
KPEQIRSKIVEGRIRKRLEELALLEQPYIKNDKVVVKDWVKQTIATIGENIKVKRFVRYN
LGEGLEKKSQDFAAEVAAQTAAKPAEPAKELPAEAEAEAKETAQKPPAVVVSAALVKQLR
EETGAGMMDCKKALSETGGDLEKAQEYLRKKGLSAADKKSSRLAAEGRIGSYIHDSRIGV
LIEVNCETDFVGRSEKFKELVDDLAMQVVACPQVQFVSVEDIPENIRNKEKELEMQRDDL
MSKPENIREKIVEGRISKRFGELALLEQPFIKNDSVLVKDLVKQTVAALGENIKVRRFVR
FTLGESTEDTETGAQA
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgacacctgtgctcccgtgttctacaagtaatatttgtctcattcctggaactgccttt
tcaataaagaagaataatagtctcaaaaatggaagtttgtcaaggaaatctacaaaatat
gcatcatcctcacaaagacttgtgttgcctcttcctggttttgttaagttgttcccacaa
taccacagggattgtgctatggtccatagatctgtagcgagtaccgtatcagccacaggg
actgatgtagcagtagaggagccagattcacctgttgttgataaagattctgatggggtt
acagagattccagcagcagatgcagttgaaacaattgattcctccaccaaagcaggttca
agtcctgctccagctcaatctagtcgttcaaagggcagtaggaaaagtgagatgccacct
gtaaagaatgaggacctggttcctggtgcaacatttactggcaaagtaaggtcaatccag
ccatttggtgcttttgttgattttggagctttcacagatggacttgtacatgtttcaaag
ttgagtgacagctttgttaaggatgttggaagtgttgtatctgttggtcaagaagtaaag
gtgaggttagttgaggcaaacaccgagacagggcggatttctcttactatgcgtgaaaat
gatgatatgagtaagtttcagcaacggaatgattctcctgccactgggagcagcaatagg
caggctgcccgaaggaacacttcaaagcccaaccaaagaaaagaagaggtaaaaagctca
aagtttgttaaagggcagaatctagagggcacagtaaaaaatctgaccaggtctggtgct
tttatatctcttcctgagggtgaggaaggattcctacccagatcagaagaatctgatgat
gtatttgcaggcatgatgggggactcatcactgcagatcggccaggaagtcagtgtcagg
gtgttgcgtatcacaaggggacaagttaccttgacaatgaaaaaagaagacgctgataaa
ctggacacagagcttatccaagggattgtccatactgcgacgaacccatttgtgctggct
ttccgtaagaacaaggatattgctgcatttttggatgaaagggagatagcaacagaacag
cctgaaaaaccaataccttcagtgcaaataggagagaaaaaccaaactgaacctttacct
aatattgctgaagtgcaggaccaaccagtaagcagtgatgaggtatcgagcagcatccct
tcaatggtggatgaatcagtagagggtgatgagacttctttaaaggaggtggttgtgggt
gccaatgttgcctccgatgagaagcagccagaaactgttgaatctagtgttgatagtaca
gtacagactgtagagaaagaagcagaggtcactggctataaggagccagaaagcatagag
tctagcacaccacaaaatgtggacgatacagttcagacattagagaagaaagcagtggct
gatgatgataaggagccagaaagcatggaatctagcacatcacaaaacgtggatgataca
gttcaggccttagagaaagaagcagaggccaacgataaggagccagaaagcatagagtct
agtttatcacaaagtgttgatgatagtattgcaggatcagataaggtagaaagcatagaa
aattctgatgcatctggagatacatccgaggctcaaattatatcttcagaaagtctaacc
agtgaagaagttgttgagaaccaagttaaaagtactgaggatgaaatgcagattcaaact
cctgctgctgagactgaaattacttctgcctcacaacttgaagataaaaaggtggaacct
gcgcctgagataaatggcactgtgggtgcttcaaacggacaaagtggcagtctttctcct
aaggagagtgtgactacagcaactatatctccagttctagtgaagcaacttcgtgaagac
acaggagcaggaatgatggattgcaagaaagccctttcagaaactggaggggacattgtt
aaagctcaggagttccttagaaagaaaggtttagcaagtgcagaaaagaaggctagtaga
gccacagctgaaggaagaattggttcgtacattcatgatagcaggattggggtcctagta
gaagcgaactgtgaaacagattttgtctcccgtggtgacattttcaaggaactggtggat
gatatagccatgcaggtggctgcatgccctcaggttcagtaccttgttacagaagatgtg
cctgaagatattttaaacaaggaaaaagagattgaaatgcagaaggaagatctcttgtca
aaaccggagcaaataagatcaaagattgtagaagggcgtataaggaagaggcttgaggag
ctggcattgctggagcagccctacattaagaatgacaaggtagtagtgaaggactgggtg
aagcagacaattgcaacaattggtgaaaatattaaagtgaagaggtttgttcgctacaat
cttggtgaaggtttggagaagaagagccaggattttgctgctgaggtggctgctcaaact
gcagcaaaaccagcagaaccagcaaaagagctgcctgcagaagcagaagcagaagccaag
gaaactgcccaaaagccaccagcagtagtagtttctgctgctcttgttaaacaactgcgg
gaagaaactggagctggaatgatggactgcaagaaggctctctctgaaactggaggggat
cttgagaaggcacaagagtatctcagaaagaagggtctttcagctgctgataaaaaatcc
agccgtcttgcagctgaaggcagaattggttcgtatatccatgactcccgtattggagtg
ctgatagaagtaaactgtgaaactgactttgtgggaagaagtgaaaaattcaaggaattg
gttgatgatctagcaatgcaagttgtggcctgcccacaagtgcagtttgtatcagttgaa
gatattcccgagaacattcggaacaaagaaaaggagcttgaaatgcagagagacgatctt
atgtcgaaaccagagaacataagagagaagattgttgagggcaggatctcaaagaggttc
ggagagcttgctcttctagagcagccattcatcaagaatgatagtgttttggtgaaggat
ttggtgaaacagactgttgctgctcttggggagaacataaaagtccgcaggtttgttcgg
tttactcttggagaatcaactgaagatacagaaacaggagcccaagcataa
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