Populus nigra (Lombardy poplar): 133673787
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Entry
133673787 CDS
T10372
Name
(RefSeq) preprotein translocase subunit SCY1, chloroplastic-like
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03060
Protein export
pnz04141
Protein processing in endoplasmic reticulum
pnz04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
133673787
04141 Protein processing in endoplasmic reticulum
133673787
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133673787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133673787
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pnz02044
]
133673787
Membrane trafficking [BR:
pnz04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
133673787
Secretion system [BR:
pnz02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
133673787
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Motif
Other DBs
NCBI-GeneID:
133673787
NCBI-ProteinID:
XP_061950660
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Position
15:11309049..11315221
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AA seq
532 aa
AA seq
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MLLTVREACPCSPISFNLSRINPTRASQRLKTSVCRASFSVQPKPNTKSWNTTLNANSFD
PLGINSNVPSSLNASWESLLAFLSPIFESASSTKKDKRGVAAAIEDSSIDFGDFFKGPLP
GKFLKLLGFLALSRLGIYIPLGGVNQEAFAGNLDQNSLLSTLDSFSGGGIGRLGICSLGI
VPFINAQIVFQLLAQIYPKLQDLQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRP
YVDDFNTQWVLTSVTLLTLGSVFTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTA
AEAFQDGNYVGLGTIIFSFFLLVLGIVYVQEAERKIPLNYASRYTSRSDGLQKSAYLPFK
VNSSGVMPIIFSTSSLALPGTLARFTGISALKKAALALNPGGSFYLPTNILLIAFFNYYY
TFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLKTVLSRISVLGSAFLAILAAGPSVIE
QISHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDIDRYGP
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgttgttaactgtgagagaagcatgtccttgctcgccaattagcttcaacctctctcgt
atcaatcccacaagagcctctcaaagactcaaaacatcagtttgcagagccagcttctct
gtccagccaaaacccaacaccaagtcgtggaacactacccttaacgccaatagttttgat
cccttgggtattaattcaaatgtaccatccagtctaaatgcttcttgggaaagtcttcta
gccttcttatcgccaatatttgagagtgcttcgagtacaaaaaaagataagcgaggagtt
gcagctgcaatcgaggacagttccattgattttggcgatttcttcaaaggcccattacca
ggaaaatttctcaagcttttggggtttctggctctatcccgtcttgggatatatataccc
ctaggtggggtaaatcaggaggcattcgctggaaatttagatcagaatagcttattgagc
actttggattcattttctgggggaggcattggtagacttggaatatgttcactaggaatt
gttccctttatcaatgcccagattgtgtttcagcttcttgctcaaatttatcccaagttg
caagatcttcagaagagagaaggtgaagcaggaagaaagaaaattcttcagtatactcgg
tatgcttcagttggttttgctatagtacaggcaattggtcaggttctttaccttcgtcct
tacgttgatgactttaacacgcagtgggttctaacatctgttactttattgacacttggc
tctgtgtttacaacttacattggagaacgaatctctgatctcaaacttggaaatggtaca
tctcttttgatatttacaagtattatttcctacttgccggcatcttttggtcggactgct
gcagaggcatttcaggatggtaactatgttggacttggcaccatcatcttttcgttcttc
ctattagttcttggtattgtctatgttcaggaggcagaaagaaagattccactcaactat
gcctcaagatataccagcagaagtgatgggcttcaaaaatctgcttatctaccctttaag
gtaaatagttctggggtgatgccaattatcttttctacatcatcattggctcttcctggc
accctagcgcggttcactggaatatctgcactgaagaaagctgcattggctttgaacccg
ggaggttctttctatctcccaaccaatatcctattaatagcgttcttcaactattactac
accttccttcaattagaccccgatgatgtgagtgaacagttgaagcgccaaggtgcatca
attccacttgtacgaccgggtaaaagtaccgctgcttttcttaaaacagttcttagccgc
atatctgttctgggttctgcctttttggctatcctggctgctggtccttctgtgattgaa
caaatctcacacttgactgcatttcgaggatttgctggcacttccgtcctgattcttgtt
ggttgtgcaacagacactgcaagaaaagttcaagcagaaataatatcccagaagtacaag
aacatagagttttatgacattgacaggtatggtccataa
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