KEGG   Populus nigra (Lombardy poplar): 133673870
Entry
133673870         CDS       T10372                                 
Name
(RefSeq) ras-related protein RHN1-like isoform X1
  KO
K07887  Ras-related protein Rab-5A
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz04144  Endocytosis
pnz04145  Phagosome
pnz04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    133673870
   04145 Phagosome
    133673870
   04148 Efferocytosis
    133673870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pnz04131]
    133673870
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pnz04147]
    133673870
   04031 GTP-binding proteins [BR:pnz04031]
    133673870
Membrane trafficking [BR:pnz04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    133673870
 Endosome - Lysosome transport
    133673870
Exosome [BR:pnz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   133673870
  Exosomal proteins of other body fluids (saliva and urine)
   133673870
  Exosomal proteins of colorectal cancer cells
   133673870
  Exosomal proteins of bladder cancer cells
   133673870
GTP-binding proteins [BR:pnz04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    133673870
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA RsgA_GTPase AAA_24 TsaE AAA_16 ATPase MMR_HSR1 SRPRB PduV-EutP
Other DBs
NCBI-GeneID: 133673870
NCBI-ProteinID: XP_061950776
LinkDB
Position
15:9233238..9242857
AA seq 199 aa
MARTGSNNIQAKLVLLGDMGTGKTSLVLRFVKGQFLEFQESTIGAAFFTQVLSLNEATIK
FDIWDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFERAKKWVTELQRQGNPNLIMFL
VGNKVDLQEKRKVGIEEGEQYAKENGMVFLETSAKTAQNVNELFYEIAKRLAKKAPSRPI
GMKLHRRPQETRRRMFCCS
NT seq 600 nt   +upstreamnt  +downstreamnt
atggcaaggacaggaagcaataacatacaggccaagctggtgctcctcggggacatgggg
accgggaaaacaagtttggtactgaggtttgtcaaggggcaatttttggagttccaggaa
tcaacaattggagcggcctttttcactcaagttttgtcattgaatgaggcaactattaag
tttgatatatgggacacagctgggcaggaacggtaccatagcttggcaccaatgtactat
cgcggtgcagctgcagccgttgtggtatacgatatcacaagcatggattcatttgaacga
gctaaaaagtgggttactgaattgcagagacaaggaaatccaaatctgataatgttctta
gtaggcaacaaggttgacttgcaagagaagagaaaagttggcatcgaggaaggtgagcag
tatgctaaagaaaatggaatggtatttcttgaaacatctgcgaaaaccgcccagaatgtg
aatgagctcttttacgaaatagctaagagattggccaaaaaagccccttcacgtccaatt
ggaatgaaattgcataggagacctcaagaaactagaagaagaatgttttgttgctcctga

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