Populus nigra (Lombardy poplar): 133673895
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Entry
133673895 CDS
T10372
Name
(RefSeq) putative ABC transporter B family member 8 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133673895
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnz02000
]
133673895
04147 Exosome [BR:
pnz04147
]
133673895
04090 CD molecules [BR:
pnz04090
]
133673895
Enzymes [BR:
pnz01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
133673895
Transporters [BR:
pnz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
133673895
Exosome [BR:
pnz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133673895
CD molecules [BR:
pnz04090
]
Proteins
133673895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
Zeta_toxin
ABC_ATPase
AAA_21
AAA_29
RsgA_GTPase
AAA_24
AAA_15
PRK
Motif
Other DBs
NCBI-GeneID:
133673895
NCBI-ProteinID:
XP_061950809
LinkDB
All DBs
Position
15:complement(10051399..10057976)
Genome browser
AA seq
1232 aa
AA seq
DB search
MNSLKKNERRGEERKSIANIFRYADWNDILLMLLGTIGAIGDGMSTNCLLVFASRIMNSL
GYGQTRQDNYNFMVEVQKCSLDFVYLGLAVMVMAFMEGYCWSKTSERQVLKIRYKYLEAI
LRQEVGFYDSQEATTSEIINSISNDTSLVQEVLSEKVPIFLMHASVFFSGLAFATYFSWR
LSLVAFPTLLLLIIPGMIYGKYLLYLSKKARTEYGKANSIVERALSSIKTIYSFTAEKRI
IDRYSEILDRTTKLGIKQGIAKGLAVGSTGLSFAIWAFLAWYGSHLVMYKGESGGRIYAA
GISFILSGLSLGIALPDLKYFTEASVAATRIFKRIDRVPEIDSEDTKGRVLDKIQGQIVF
QNVSFTYPCRPDAVVLKDFNLKVEAGKTVALVGASGSGKSTAIALLQRFYDVDSGIVKID
GVDLRTLNLKWIRGQMGLVSQDHALFGTSIKENIMFGKLDATMDEIMAAAMAANAHNFIR
QLPEGYETKVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNALD
QASMGRTTLVVAHKLSTVRNADLIAVVDNGSIIEIGSHNDLINIQNGHYAKLAKLQRQFS
CDEQEQNPEIRFSSVTSSAARKSTGKSSPAIFASPLPVDDSPKPVHIPAPSFSRLLSLNA
PEWKQGLMGSISAITFGAVQPVYALTVGGMIAAFFAPNHDEVRDRIRLYSLIFCSLSLFS
IIINLVQHYNFAYMGERLTKRIRLRMLEKILGFETAWFDEEENSSGALCLRLSAEASMVK
TLIADRVCLLVQTTSAVTIAMIMGLVVAWKLAIVMIAVQPLTILCFYTKKILLSSISTNF
VKAQNQSTQIAVEAVYNHRIVTSFASVGKVLQLFDEAQEEPRKEGRKKSWLAGIGMGSAQ
CLTFMSWALDFWFGGTLVEKGEISAGDVFKTFFILVSTGKVIAEAGSMTSDLSKGSTAVA
SVFKILDRQSLIPGSYHAGDGSSGTKLEKLGGKIEMKNIDFAYPSRPETLILRQFCLEVK
PGTSVGLVGKSGCGKSTVIGLIQRFYDVEKGSVRVDGVDIRELDIQWFRKRTALVSQEPV
LYSGSIRENIMFGKLDASENEVVEAARAANAHEFISSLKEGYETECGERGVQLSGGQKQR
IAIARAILRNPTILLLDEATSALDVQSEQVVQEALDRIMVRRTTIVVAHRLNTIKNLDSI
AFVADGKVMERGTYAQLKNKKGAFFDLASLQT
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgaattctctaaagaagaacgagaggagaggagaggagaggaagtctatagccaatatc
tttagatatgcagattggaatgatatattgcttatgctgctgggtactattggagctatt
ggagatggcatgtctacaaattgcttactggtgtttgccagccgcataatgaatagcttg
ggttatggtcagacacgacaagataattacaatttcatggttgaggtccaaaagtgcagt
ttagactttgtgtacttgggattagcggtcatggtgatggcttttatggagggttactgt
tggagtaaaacgagcgagagacaggttttgaagatccgatacaagtatttggaagctata
cttcgacaagaagttgggttctatgattcacaggaagcaactacttcagagatcatcaac
agcatatcaaacgatacttctctcgtacaagaagtactaagtgaaaaggtgcccatattt
ttgatgcacgcgtctgtattcttctcgggacttgcctttgccacatacttttcatggaga
ctgtctttagtagccttcccaactcttcttcttctaatcatccctggaatgatatacgga
aaataccttctctacttgtcaaagaaagctcggacggagtatggcaaagcaaactccatc
gtggagcgggcattaagttccatcaagactatttattcattcactgccgagaagagaatc
atcgataggtattcagaaatattggatagaacaacaaaattgggaatcaagcagggtatt
gccaaaggtcttgctgttgggagtacagggctttcttttgcaatatgggctttccttgct
tggtatggaagtcatttggtcatgtacaaaggagaaagtggagggaggatctatgctgct
ggcatttccttcatattgagtggactatcccttggaattgcacttcctgatctgaagtac
ttcacagaagcttctgttgctgctacacggatattcaaaaggattgatagagttccagaa
atcgatagcgaagacacaaaaggacgtgtattagacaaaatccaaggccaaattgtattc
cagaatgtcagtttcacatacccttgtcgtccagatgccgttgttctcaaagatttcaac
ctgaaagttgaggcaggaaaaacagtagctcttgttggagcaagtgggagtggaaagtcc
acagcaattgcgttactccagcgtttctatgatgttgatagtggcattgtcaagattgac
ggtgttgatctaagaacattgaatttgaaatggataagaggacaaatgggtcttgttagt
caagaccatgctttgtttgggacttcaataaaagagaatatcatgtttgggaagcttgat
gccaccatggatgaaatcatggctgcggctatggctgcaaatgctcacaactttataagg
cagcttccagaggggtatgaaacaaaggttggtgaaagaggagcactcctatctggggga
caaaagcagcgaattgccattgctagagcaataatcaagaaccctgtgattctcctactt
gatgaagcaaccagtgctcttgactccgaatcagaaacactggtccaaaatgcacttgat
caagcctccatgggaagaactacactggttgttgcacacaagctctctacagttcgaaat
gcagacctcattgcagtcgttgacaatggtagcatcattgaaataggttcccacaatgat
ctcatcaacatacaaaatggccactatgccaaactagcaaagttacagagacaattcagc
tgtgatgagcaagaacaaaatcctgaaattcgcttttcttcagttactagtagtgccgct
aggaaaagtacaggaaaatcaagtccagccatctttgcttcaccattgcctgttgatgat
agcccaaaaccagtgcacatccccgcgccttccttctctcggcttctttctttaaatgcc
cctgaatggaagcaaggcctgatgggaagtatttcagctataacatttggtgctgtgcaa
cctgtctatgcgttaaccgttggtggaatgattgcagctttctttgcaccaaaccatgat
gaagtgcgtgaccgaatacgtttatactctttaatattctgttctctttccttgttctcc
atcattataaaccttgtgcaacactacaattttgcatacatgggtgagaggctaaccaag
agaattcgattgagaatgctagagaagatcttgggttttgagacagcttggtttgatgaa
gaggaaaactctagcggggctttatgtttaagattgagcgctgaagcctccatggttaaa
acccttatcgcagacagagtttgtttattagttcaaaccacttctgcagttactatagca
atgataatggggctagtcgtggcttggaagcttgcaattgttatgatagcggtgcaaccc
ctcaccattctgtgtttctacacgaagaaaattttgctgtctagtatttcaacaaatttt
gtcaaggcacaaaatcaaagtactcaaattgcggtggaagcggtctataatcatagaatt
gtgacatcatttgcaagtgtgggaaaggtgcttcaactttttgacgaggctcaggaggaa
ccaaggaaggagggcaggaaaaagtcgtggctagcaggaattggcatgggatctgctcag
tgcctaactttcatgtcatgggctctagacttctggtttggaggtactctagtggaaaag
ggagagatatcggcaggagatgtgttcaagacatttttcattttagtgagcaccgggaag
gttatagctgaggcagggagcatgacttcagatttatccaaaggttcaacagcagtggct
tctgtgttcaagattctggacaggcaatccctgattccaggttcttaccatgccggtgat
ggaagtagtggaacaaagttggaaaaactaggtggcaagatagagatgaagaatattgat
tttgcatatccaagccggccggagaccctaatacttcggcagttctgcttggaggtgaag
ccaggcactagcgttggactagtaggaaaaagtggatgtggaaaatcaaccgtgattggt
ttgattcaaagattctacgatgtcgagaaggggtcagtaagagtagatggagtggacata
agggaactagacatccaatggttcaggaagcgcacggctcttgttagtcaagaacccgtg
ttatattcaggaagcatccgcgaaaacatcatgttcgggaagcttgatgcgtccgagaat
gaggtggtggaggctgcaagagcagcgaatgctcatgagtttatctcatcactcaaagaa
gggtatgaaacagaatgcggtgaaagaggagtgcagctatcgggagggcaaaagcaaaga
atagcaatagcaagagctatacttcgcaacccaaccatcctattactagacgaggcaacg
agcgctctcgatgtgcaatctgagcaggttgtgcaagaagcactggaccgaatcatggtt
agaaggacgacgattgtggtagctcatcggcttaacactataaagaatctagattccatt
gccttcgtcgccgatggaaaggtgatggagcgaggaacctacgctcaactaaagaacaag
aaaggtgccttctttgacttagctagtcttcagacttag
DBGET
integrated database retrieval system
