Populus nigra (Lombardy poplar): 133673955
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Entry
133673955 CDS
T10372
Name
(RefSeq) coatomer subunit beta-1
KO
K17301
coatomer subunit beta
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133673955
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pnz04147
]
133673955
Membrane trafficking [BR:
pnz04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
133673955
Exosome [BR:
pnz04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
133673955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
Cnd1
HEAT
Coatomer_g_Cpla
Alpha_adaptinC2
Motif
Other DBs
NCBI-GeneID:
133673955
NCBI-ProteinID:
XP_061950885
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All DBs
Position
15:524141..529725
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AA seq
949 aa
AA seq
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MEKSCTLLVHFDKGTPAIATEIKEALEGSDVSAKIDAMKKAISLLLNGETLPQLFITIVR
YVLPSEDHTVQKLLLLYLEIIDKKDQKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL
CRLNETEIIEPLIPSVLQNLEHRHPFIRRNAILAVMSIYKLPQGEQLLVDAPEMIEKVLS
TEQDQSAKRNAFLMLFTCDQDRAINYLLTNVDKVSEWGELLQMVVLELIRKVCRTNRGEK
GKYIKIIISLLNAPSNAVIYECAGTLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIVL
DRLNELKSSHREIMVDRIMDVLRALSSPNLDIQRKTLDIVLELITPRNINEVVLMLKKEV
MKTQNGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVAIFVR
EIIETNPKLRVSIIIRLLDTFYQIRAARVCCCALWIIGEYCLSLSEVESGIATIKQCLGE
LPFYSVSEEGEAPTDASKNSQQPSSVTVSSRRPAILSDGTYATQSAASETAFSPPSIVQG
SLAAGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRGEVNKVSTQALLIMVSMIQL
GQSPVLSHPIDCDSYDRIVLCIRLLCSTGDEVRKIWLQSCRQSFVKMLSEKQLRETEELK
AKAQVSYAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFIKDGDDANKLNRILQ
LTGFSDPVYAEAYVTVHHYDIVLDVTVINRTTETLQNLCLELATMGDLKLVERPQNYTLA
PESSRQIKANIKVSSTETGVIFGNIVYEASNVLERTVVVLNDIHIDIMDYISPAVCTDAA
FRSMWAEFEWENKVAVNTIIQSEKDFLDHIIKSTNMKCLTAPSALDGDCGFLAANLYAKS
VFGEDALVNVSIEKQLDGKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggagaagtcttgcactcttcttgtgcattttgataaaggaaccccagctatagctaca
gagatcaaagaagcacttgaaggcagtgatgtgtcagcgaagattgatgccatgaagaag
gcaattagtcttctattaaatggggaaaccttaccacagctttttatcaccatagtcaga
tatgtcctgccatcagaagaccacacggtccagaaacttttgcttttgtatctggagatt
attgacaagaaggaccagaagggtagggtgttaccagagatgattctcatttgccaaaac
ctgaggaacaatctgcagcaccccaatgaatacattcgaggggtgacactgaggtttctc
tgtcgattgaatgagacagaaataattgaaccgcttatcccctcagtcctccagaatctt
gaacaccggcatccgttcattaggaggaatgctatcttagctgtgatgtccatttataag
cttcctcagggtgagcagcttttggttgatgctcctgaaatgattgagaaagttctatca
acagagcaggatcaatcagcaaagaggaatgcatttctcatgctatttacttgtgatcaa
gatcgggccattaattacctcttgaccaatgttgataaggtctctgaatggggtgaactg
ctgcagatggttgtcctagagttgattcggaaggtgtgcagaacgaatcggggagagaag
ggaaaatacattaagatcattatatcattgctgaatgccccttctaatgcagttatttac
gagtgtgctgggacacttgtttctctgtcatctgcacctactgctatcagagctgctgcc
aacacctattgccagcttcttctctctcagagtgacaacaacgtgaagcttattgttctt
gatcgtctgaatgagctcaagtcttctcatagagagatcatggttgacaggataatggat
gtgcttagggcactatccagcccgaatcttgacattcagagaaagactctagatattgtc
cttgagttgatcaccccgaggaacatcaacgaggttgttctcatgttgaagaaggaagtt
atgaagactcaaaatggagagcttgagaagaatggcgagtacaggcagatgctcatccaa
gccatccattcttgtgccatcaagttcccagaggtggcaagcacagtggttcacctgttg
atggatttcctgggtgacagtaatgttgcttcagctattgatgtggcaatatttgtccgg
gagataattgagacaaatcccaaactgagggtttcaattataataagactgttggacacg
ttctaccagatacgagctgcaagggtttgctgctgtgctctctggattattggcgagtat
tgcctatccctctctgaagttgaaagtggtattgcaactatcaagcaatgcctgggagag
ctaccattttattcagtttcagaagaaggggaagcacccactgatgcttctaagaactct
caacaaccaagttctgttactgtttcttctagaagacctgccattctttctgatgggact
tatgcaacacagagtgctgcttctgaaactgccttttcgcctccaagcattgttcagggt
tcattggctgctgggaacttgagatcccttcttctgactggtgattttttcctcggagca
gttgtggcgtgcactttgacaaagcttgttctgagattggaagaggtgcagccttctagg
ggtgaagtaaacaaagtatccacacaggcattgttgatcatggtctctatgatacaactt
gggcaatcaccagtcctgtcacacccaattgactgtgactcttatgataggattgtcctt
tgcataagattactatgcagtacaggtgacgaggtcaggaagatatggctgcagtcttgc
cgtcagagttttgtcaaaatgctttcagagaaacagttgagggaaactgaggaactaaag
gcaaaggctcaggtttcttatgcacagccagatgacctcattgatttctaccatttgaag
agcagaaagggtatgagtcagctggagttggaagatgaagttcaagatgatttgaagcga
gcaactggggagttcatcaaggacggggatgatgcgaataagcttaatcgcatccttcag
ctcacaggatttagtgaccctgtttatgctgaagcttatgtgacagttcatcactatgac
attgtgcttgatgtcacagtgatcaacaggacaacagaaactctccagaatttgtgcttg
gaacttgccacaatgggtgatctgaaactggttgagcggccccagaactacaccctagct
cccgagtctagtaggcagataaaggccaacatcaaggtgtcctcaacagagacaggagtg
atttttggcaatattgtgtatgaggcatccaatgtacttgagcggacagttgttgtcctt
aatgacatccatattgatatcatggattacatctctcccgcggtttgcacagatgcagct
ttcaggtcaatgtgggcggagtttgaatgggaaaacaaggtcgctgtgaacacaataatc
caaagtgagaaggattttctggaccacatcatcaagtctaccaatatgaagtgtctcacc
gcaccgtccgcactggatggtgactgcggtttcctggctgcaaatttgtacgccaagagt
gtttttggtgaggatgctcttgtcaacgtgagcatcgagaagcaattggatgggaagctt
agtgggtacatccgtataaggagcaagacccagggaatagccctcagcttaggggataag
atcactcttaagcagaagggaggcagttga
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